RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 THAP11Q96EK4 314 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 NAF1Q96HR8 494 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 CD274Q9NZQ7 290 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 SCHIP1Q9P0W5 487 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 HIST1H2AGP0C0S8 130 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 HIST1H2ADP20671 130 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 SSTR1P30872 391 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 GNASQ5JWF2 1037 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 ELMSAN1Q6PJG2 1045 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 WNK4Q96J92 1243 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 HIST1H2AHQ96KK5 128 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 HIST1H2AJQ99878 128 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 H2AFJQ9BTM1 129 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 KCTD10Q9H3F6 313 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 IL1RL2Q9HB29 575 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 RALBP11234 206 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 MAPRE1Q15691 268 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 AADACL2Q6P093 401 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 ZPBP2Q6X784 338 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 BRSK2Q8IWQ3 736 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 MREGQ8N565 214 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 LNX1Q8TBB1 728 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 BTNL10A8MVZ5 291 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 RNF225M0QZC1 329 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 SKAP2O75563 359 aaPredicted RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 FGRP09769 529 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 TGFB3P10600 412 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 THRAP10827 490 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 CYP2F1P24903 491 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 HOXD10P28358 340 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 SOX11P35716 441 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 CPT1AP50416 773 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 MGAT5BQ3V5L5 792 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 AGAP9Q5VTM2 703 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 IRF2BP1Q8IU81 584 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 ADGRF2Q8IZF7 708 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 CLEC4FQ8N1N0 589 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 TCP10LQ8TDR4 215 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 MROH8Q9H579 483 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
SPAST-201ENST00000315285 AAR2Q9Y312 384 aaKnown RBP14.25□□□□□ -0.13
SPAST-201ENST00000315285 KRT16P08779 473 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 GRK2P25098 689 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 AVPR1AP37288 418 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 IRX1P78414 480 aaPredicted RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 NFIL3Q16649 462 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 MFN1Q8IWA4 741 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 CYGBQ8WWM9 190 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 DCUN1D1Q96GG9 259 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 TAGLN3Q9UI15 199 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 BARX2Q9UMQ3 279 aaPredicted RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 ANKRD26Q9UPS8 1709 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 SERPINB5P36952 375 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 KCNK10P57789 538 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 TWF1Q12792 350 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 SNX17Q15036 470 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 THEMIS2Q5TEJ8 643 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 APBB2Q92870 758 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 APOL2Q9BQE5 337 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 TSPAN16Q9UKR8 245 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 MAGEA13PA6NCF6 341 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 H2AFYO75367 372 aaKnown RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 ODC1P11926 461 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 PKN2Q16513 984 aaKnown RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 STRA8Q7Z7C7 330 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 ZBTB45Q96K62 511 aaPredicted RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 TBCBQ99426 244 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 MUC3BQ9H195 1237 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 ACP6Q9NPH0 428 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 PDP2Q9P2J9 529 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 DTNAQ9Y4J8 743 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 ADGRA2Q96PE1 1338 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 CYB561D2O14569 222 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 B3GAT3O94766 335 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 GCLCP48506 637 aaPredicted RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 MMP14P50281 582 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 BST2Q10589 180 aaKnown RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 IARS2Q9NSE4 1012 aaKnown RBP14.24□□□□□ -0.13
SPAST-201ENST00000315285 FAM198AQ9UFP1 575 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
SPAST-201ENST00000315285 RHOBTB1O94844 696 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 SUPT7LO94864 414 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 GJB6O95452 261 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 PTPN7P35236 360 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 OR1G1P47890 313 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 GLRBP48167 497 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 DDR1Q08345 913 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 KPNB1Q14974 876 aaKnown RBP14.23□□□□□ -0.13
SPAST-201ENST00000315285 UNC45BQ8IWX7 931 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 KATNAL2Q8IYT4 538 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 RIC8BQ9NVN3 520 aa14.23□□□□□ -0.13
SPAST-201ENST00000315285 ITGA11Q9UKX5 1188 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms