RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 ROPN1BQ9BZX4 212 aaPredicted RBP25.18■■□□□ 1.62
RFWD2-201ENST00000308769 EPN3Q9H201 632 aa25.18■■□□□ 1.62
RFWD2-201ENST00000308769 ROPN1Q9HAT0 212 aaPredicted RBP25.18■■□□□ 1.62
RFWD2-201ENST00000308769 RSPH14Q9UHP6 348 aa25.18■■□□□ 1.62
RFWD2-201ENST00000308769 ACAT1P24752 427 aaKnown RBP25.17■■□□□ 1.62
RFWD2-201ENST00000308769 CCT5P48643 541 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 HDAC4P56524 1084 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 EIF3EP60228 445 aaKnown RBP25.17■■□□□ 1.62
RFWD2-201ENST00000308769 CACNB2Q08289 660 aaPredicted RBP25.17■■□□□ 1.62
RFWD2-201ENST00000308769 B4GALNT4Q76KP1 1039 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 RELL1Q8IUW5 271 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 UNC45BQ8IWX7 931 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 TOP6BLQ8N6T0 577 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 MDM1Q8TC05 714 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 SPATA18Q8TC71 538 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 GAD1Q99259 594 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 CASP8AP2Q9UKL3 1982 aa25.17■■□□□ 1.62
RFWD2-201ENST00000308769 ADAMTS4O75173 837 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 WARSP23381 471 aaKnown RBP25.16■■□□□ 1.62
RFWD2-201ENST00000308769 KRT81Q14533 505 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 MORF4L2Q15014 288 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 TNFAIP8L3Q5GJ75 292 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 MFSD5Q6N075 450 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 RSAD2Q8WXG1 361 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 TNIP3Q96KP6 325 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 SNRNP25Q9BV90 132 aaKnown RBP25.16■■□□□ 1.62
RFWD2-201ENST00000308769 MAK16Q9BXY0 300 aaKnown RBP25.16■■□□□ 1.62
RFWD2-201ENST00000308769 PPANQ9NQ55 473 aaKnown RBP25.16■■□□□ 1.62
RFWD2-201ENST00000308769 CTNNAL1Q9UBT7 734 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 CYB561D2O14569 222 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 ASGR1P07306 291 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 MAGEA4P43358 317 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 CA9Q16790 459 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 CCDC38Q502W7 563 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 WSCD1Q658N2 575 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 CYP4F22Q6NT55 531 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 SLC26A9Q7LBE3 791 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 FOXP3Q9BZS1 431 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 TSPYL2Q9H2G4 693 aaPredicted RBP25.16■■□□□ 1.62
RFWD2-201ENST00000308769 SAYSD1Q9NPB0 183 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 XPNPEP3Q9NQH7 507 aa25.16■■□□□ 1.62
RFWD2-201ENST00000308769 CLDN5O00501 218 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 MCF2LO15068 1137 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 RBP3P10745 1247 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 CCND3P30281 292 aaPredicted RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 RPL34P49207 117 aaKnown RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 ATXN1P54253 815 aaKnown RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 NRLP54845 237 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 FASTKD3Q14CZ7 662 aaKnown RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 SELENOSQ9BQE4 189 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 AGO3Q9H9G7 860 aaKnown RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 NDUFAB1O14561 156 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 IL4RP24394 825 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 MMP13P45452 471 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 CTCFP49711 727 aaPredicted RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 MGAT3Q09327 533 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 BOLA3Q53S33 107 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 HP1BP3Q5SSJ5 553 aaPredicted RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 ZC3H18Q86VM9 953 aaKnown RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 FUKQ8N0W3 1084 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 TAB3Q8N5C8 712 aaPredicted RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 FAM71DQ8N9W8 422 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 PRCCQ92733 491 aaPredicted RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 RNF157Q96PX1 679 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 CNOT10Q9H9A5 744 aaKnown RBP25.15■■□□□ 1.62
RFWD2-201ENST00000308769 MIOSQ9NXC5 875 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 SHOC2Q9UQ13 582 aa25.15■■□□□ 1.62
RFWD2-201ENST00000308769 NOMO1Q15155 1222 aa25.14■■□□□ 1.62
RFWD2-201ENST00000308769 TEKT4Q8WW24 435 aa25.14■■□□□ 1.62
RFWD2-201ENST00000308769 SERPINB12Q96P63 405 aa25.14■■□□□ 1.62
RFWD2-201ENST00000308769 PCDH18Q9HCL0 1135 aa25.14■■□□□ 1.62
RFWD2-201ENST00000308769 FARP1Q9Y4F1 1045 aaPredicted RBP25.14■■□□□ 1.62
RFWD2-201ENST00000308769 E7EVH7 732 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 GOLGA8MH3BSY2 632 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 RPL22P35268 128 aaKnown RBP25.13■■□□□ 1.61
RFWD2-201ENST00000308769 GAD2Q05329 585 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 PDK2Q15119 407 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 KCNA10Q16322 511 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.13■■□□□ 1.61
RFWD2-201ENST00000308769 P3H4Q92791 437 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 C11orf84Q9BUA3 381 aaPredicted RBP25.13■■□□□ 1.61
RFWD2-201ENST00000308769 DESP17661 470 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 THPOP40225 353 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 PTPN9P43378 593 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 CLCNKBP51801 687 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 KIAA0319Q5VV43 1072 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 ANKRD22Q5VYY1 191 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 C1orf228Q6PIY5 440 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 PIGZQ86VD9 579 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 MAP7D3Q8IWC1 876 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 CPT1BQ92523 772 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 NDRG1Q92597 394 aaKnown RBP25.13■■□□□ 1.61
RFWD2-201ENST00000308769 STMN4Q9H169 189 aaPredicted RBP25.13■■□□□ 1.61
RFWD2-201ENST00000308769 CYLDQ9NQC7 956 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 SLC38A7Q9NVC3 462 aa25.13■■□□□ 1.61
RFWD2-201ENST00000308769 TDRD15B5MCY1 1934 aaKnown RBP25.12■■□□□ 1.61
RFWD2-201ENST00000308769 BEST1O76090 585 aa25.12■■□□□ 1.61
RFWD2-201ENST00000308769 THP07101 528 aa25.12■■□□□ 1.61
RFWD2-201ENST00000308769 ELNP15502 786 aa25.12■■□□□ 1.61
RFWD2-201ENST00000308769 ACADSBP45954 432 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms