RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 ATAD3BQ5T9A4 648 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 FKBP1CQ5VVH2 108 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 TTC27Q6P3X3 843 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 CD302Q8IX05 232 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 JADE3Q92613 823 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 SPATC1LQ9H0A9 340 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 PLEKHA5Q9HAU0 1116 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 CPSF3Q9UKF6 684 aaKnown RBP15.82■□□□□ 0.12
LEMD3-201ENST00000308330 TMCC3Q9ULS5 477 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 KIF1AQ12756 1690 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 FARP2O94887 1054 aaPredicted RBP15.82■□□□□ 0.12
LEMD3-201ENST00000308330 GSSP48637 474 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 CD97P48960 835 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 FXR1P51114 621 aaKnown RBP eCLIP15.82■□□□□ 0.12
LEMD3-201ENST00000308330 NCKAP1LP55160 1127 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 PLA2G4FQ68DD2 849 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 OR6Y1Q8NGX8 325 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 MBD2Q9UBB5 411 aa15.82■□□□□ 0.12
LEMD3-201ENST00000308330 BAZ2BQ9UIF8 2168 aaKnown RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SNPHO15079 494 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 TMCC2O75069 709 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 GPC4O75487 556 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 NPEPPSP55786 919 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SYCP2LQ5T4T6 812 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SLC2A7Q6PXP3 512 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 KIF12Q96FN5 646 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SNX27Q96L92 541 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 TSSK1BQ9BXA7 367 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 CCSER1Q9C0I3 900 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 COG4Q9H9E3 785 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 RBAKQ9NYW8 714 aaPredicted RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 ZMAT5Q9UDW3 170 aaKnown RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 MYRFQ9Y2G1 1151 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 TSPAN1O60635 241 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 CDH16O75309 829 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 IFNA16P05015 189 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SKIV2L2P42285 1042 aaKnown RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 MXD4Q14582 209 aaPredicted RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 NR1I3Q14994 352 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SNX17Q15036 470 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 RUNDC3AQ59EK9 446 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 SHC4Q6S5L8 630 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 C16orf62Q7Z3J2 963 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 LUZP2Q86TE4 346 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 NUP93Q8N1F7 819 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 LRRC71Q8N4P6 559 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 MINDY2Q8NBR6 621 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 GMCL1Q96IK5 515 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 HNRNPABQ99729 332 aaKnown RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 KIAA1683Q9H0B3 1180 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 MYLK2Q9H1R3 596 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 ZBTB11O95625 1053 aaPredicted RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 GNG2P59768 71 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 CDC42EP1Q00587 391 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 RPS6KA2Q15349 733 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 ASZ1Q8WWH4 475 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 TRIM45Q9H8W5 580 aaPredicted RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 CCDC177Q9NQR7 707 aaPredicted RBP15.81■□□□□ 0.12
LEMD3-201ENST00000308330 HEY2Q9UBP5 337 aa15.81■□□□□ 0.12
LEMD3-201ENST00000308330 EIF3FO00303 357 aaPredicted RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 TTKP33981 857 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 ATP5OP48047 213 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 NSUN2Q08J23 767 aaKnown RBP eCLIP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 ISLR2Q6UXK2 745 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 C4orf50Q6ZRC1 276 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 CYGBQ8WWM9 190 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 SH3KBP1Q96B97 665 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 L3MBTL3Q96JM7 780 aaPredicted RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 FARSBQ9NSD9 589 aaKnown RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 ADAMTS1Q9UHI8 967 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 SLC8A2Q9UPR5 921 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 HBP1O60381 514 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 CRYZL1O95825 349 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 ZBED1O96006 694 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 SERPING1P05155 500 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 CYP2C8P10632 490 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 XPAP23025 273 aaPredicted RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 GRIK5Q16478 980 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 ERMARDQ5T6L9 678 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 RYBPQ8N488 228 aaPredicted RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 TRPC4APQ8TEL6 797 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 P2RX7Q99572 595 aaKnown RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 NGRNQ9NPE2 291 aaKnown RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 CPT1AP50416 773 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 KBTBD2Q8IY47 623 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 GUF1Q8N442 669 aaKnown RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 CERS5Q8N5B7 392 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 TAMM41Q96BW9 452 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 ITPKCQ96DU7 683 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 CLEC4MQ9H2X3 399 aaPredicted RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 MRPL47Q9HD33 250 aaKnown RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 UVRAGQ9P2Y5 699 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 STOML2Q9UJZ1 356 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 LGALS16A8MUM7 142 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 EFHC1Q5JVL4 640 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 HMBOX1Q6NT76 420 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 MTDHQ86UE4 582 aaKnown RBP15.8■□□□□ 0.12
LEMD3-201ENST00000308330 BBS5Q8N3I7 341 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 NLGN2Q8NFZ4 835 aa15.8■□□□□ 0.12
LEMD3-201ENST00000308330 LRMDAQ9H2I8 198 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms