RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 APOPT1Q96IL0 206 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 TEPSINQ96N21 525 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 EBF4Q9BQW3 602 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 THTPAQ9BU02 230 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 VPS11Q9H270 941 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 DHX33Q9H6R0 707 aaKnown RBP17.3■□□□□ 0.36
SSH3-201ENST00000308127 SAR1AQ9NR31 198 aa17.3■□□□□ 0.36
SSH3-201ENST00000308127 DCAF8L1A6NGE4 600 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 PPP1R12AO14974 1030 aaPredicted RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 SORBS2O94875 1100 aaKnown RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 ARL2P36404 184 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 CCNJLQ8IV13 435 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 BRSK2Q8IWQ3 736 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 NLRP4Q96MN2 994 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 PGLYRP2Q96PD5 576 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 SDCBP2Q9H190 292 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 ZNF214Q9UL59 606 aaPredicted RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 USP18Q9UMW8 372 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 AFG3L2Q9Y4W6 797 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 MYO18AQ92614 2054 aaKnown RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 COL2A1P02458 1487 aaPredicted RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 TM9SF1O15321 606 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 CXCL8P10145 99 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 GRIA1P42261 906 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 AQP5P55064 265 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 ROR1Q01973 937 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 HADHQ16836 314 aaKnown RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 ZC3H12AQ5D1E8 599 aaKnown RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 EEF1DP3Q658K8 133 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 C16orf46Q6P387 395 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 FAM83AQ86UY5 434 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 POU5F2Q8N7G0 328 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 RBM15BQ8NDT2 890 aaKnown RBP17.29■□□□□ 0.36
SSH3-201ENST00000308127 HIPK4Q8NE63 616 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 CCDC110Q8TBZ0 833 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 RILPQ96NA2 401 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 TLE6Q9H808 572 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 IL1RAPL1Q9NZN1 696 aa17.29■□□□□ 0.36
SSH3-201ENST00000308127 IQANK1A0A1B0GTG1 560 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 M0QYV0 167 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 LYPLA1O75608 230 aaPredicted RBP17.28■□□□□ 0.36
SSH3-201ENST00000308127 AP1G2O75843 785 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 HSPA1LP34931 641 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 CRADDP78560 199 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 GHRHRQ02643 423 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 DUOXA2Q1HG44 320 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 PCGF5Q86SE9 256 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 MPP5Q8N3R9 675 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 CFAP61Q8NHU2 1237 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 TSC22D3Q99576 134 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 SPATS2LQ9NUQ6 558 aaKnown RBP17.28■□□□□ 0.36
SSH3-201ENST00000308127 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 LDHAP00338 332 aaKnown RBP17.28■□□□□ 0.36
SSH3-201ENST00000308127 POLE2P56282 527 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 RTP1P59025 263 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 PEX6Q13608 980 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 TRNP1Q6NT89 227 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 XYLT1Q86Y38 959 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 RDM1Q8NG50 284 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 SLC44A1Q8WWI5 657 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 PCYT2Q99447 389 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 R3HDMLQ9H3Y0 253 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 KRT82Q9NSB4 513 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 C2CD2Q9Y426 696 aa17.28■□□□□ 0.36
SSH3-201ENST00000308127 SMAPO00193 183 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 KRT7P08729 469 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 KCNA3P22001 575 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 RBL1P28749 1068 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 SLC34A1Q06495 639 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 PPP6R3Q5H9R7 873 aaPredicted RBP17.27■□□□□ 0.36
SSH3-201ENST00000308127 E7ESA3 106 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 INO80B-WBP1J3KQ70 363 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 ADCY3O60266 1144 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 CSH1P0DML2 217 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 CSH2P0DML3 217 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 ACADSP16219 412 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 MRPS5P82675 430 aaKnown RBP17.27■□□□□ 0.36
SSH3-201ENST00000308127 FOXB2Q5VYV0 432 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 DLK2Q6UY11 383 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 INO80BQ9C086 356 aaPredicted RBP17.27■□□□□ 0.36
SSH3-201ENST00000308127 XYLT2Q9H1B5 865 aa17.27■□□□□ 0.36
SSH3-201ENST00000308127 NGRNQ9NPE2 291 aaKnown RBP17.27■□□□□ 0.36
SSH3-201ENST00000308127 ZC3H7BQ9UGR2 993 aaKnown RBP17.27■□□□□ 0.36
SSH3-201ENST00000308127 PRR5-ARHGAP8B1AHC4 643 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 SPATA31C2B4DYI2 1134 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 FAM189A1O60320 539 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 DKC1O60832 514 aaKnown RBP eCLIP17.26■□□□□ 0.35
SSH3-201ENST00000308127 YWHAZP63104 245 aaKnown RBP17.26■□□□□ 0.35
SSH3-201ENST00000308127 ARHGAP8P85298 464 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.26■□□□□ 0.35
SSH3-201ENST00000308127 FAM136AQ96C01 138 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 WRNIP1Q96S55 665 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 STRIP2Q9ULQ0 834 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 TEX264Q9Y6I9 313 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 H0YCG3 227 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 APOC4-APOC2K7ER74 178 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 MSCO60682 206 aa17.26■□□□□ 0.35
SSH3-201ENST00000308127 RNF8O76064 485 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms