RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RRM2BQ7LG56 351 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 KAT2BQ92831 832 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 THAP2Q9H0W7 228 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 NEU2Q9Y3R4 380 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 PRMT2P55345 433 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 MTA1Q13330 715 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 APBB2Q92870 758 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 TATDN2Q93075 761 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 TUBB6Q9BUF5 446 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 ABCB6Q9NP58 842 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 EVA1BQ9NVM1 165 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 SSU72P8A0A1W2PR75 194 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 HMGB1P1B2RPK0 211 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CTSEP14091 401 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 INPP1P49441 399 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 RAP1GDS1P52306 607 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CCDC38Q502W7 563 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 EMBQ6PCB8 327 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CCDC3Q9BQI4 270 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 DCLK3Q9C098 648 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 TUBP50607 506 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 GBP7Q8N8V2 638 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 RXFP2Q8WXD0 754 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 OTULINQ96BN8 352 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 LENG1Q96BZ8 264 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 ASPSCR1Q9BZE9 553 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 NEUROG2Q9H2A3 272 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 A0A1W2PQJ5 194 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 HNRNPCL2B2RXH8 293 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 IFRD1O00458 451 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 KPNA3O00505 521 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 HNRNPCL1O60812 293 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 GJB1P08034 283 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 ATP5C1P36542 298 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 SERPINB11Q96P15 392 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 USH1CQ9Y6N9 552 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 SCAMP3O14828 347 aaKnown RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CYTH3O43739 400 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CYP3A4P08684 503 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 RBP3P10745 1247 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 PDK2Q15119 407 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 SV2AQ7L0J3 742 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 AKAP7Q9P0M2 348 aaPredicted RBP11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 VPS9D1Q9Y2B5 631 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 CAPN7Q9Y6W3 813 aa11.09□□□□□ -0.63
SYNPO2-201ENST00000307142 A0A0G2JLL6 359 aaPredicted RBP11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 CCL16O15467 120 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 PEX10O60683 326 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 RAMP2O60895 175 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 GLUD1P00367 558 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 MSH3P20585 1137 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 PRRT2Q7Z6L0 340 aaPredicted RBP11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 MRPL46Q9H2W6 279 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 WWOXQ9NZC7 414 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 NUDT5Q9UKK9 219 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 HDCP19113 662 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 FDFT1P37268 417 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 DUSP28Q4G0W2 176 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 IRAK1BP1Q5VVH5 260 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 DLK2Q6UY11 383 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF438Q7Z4V0 828 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM129AQ9BZQ8 928 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 DUSP11O75319 330 aaKnown RBP11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 GNRH1P01148 92 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 SYN1P17600 705 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 RENBPP51606 427 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 LRRC74AQ0VAA2 488 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 TCEA2Q15560 299 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 PSMD5Q16401 504 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 CLEC16AQ2KHT3 1053 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 SPIRE2Q8WWL2 714 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 MAML3Q96JK9 1138 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF518BQ9C0D4 1074 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 SEMA6BQ9H3T3 888 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ATP13A1Q9HD20 1204 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 C6orf203Q9P0P8 240 aaPredicted RBP11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 CRTAMO95727 393 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 TMEM253P0C7T8 217 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 SOAT1P35610 550 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 DOK6Q6PKX4 331 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 FAM47EQ6ZV65 393 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 LCA5Q86VQ0 697 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 IL17RAQ96F46 866 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 SMYD3Q9H7B4 428 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 A8MX80 341 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 PSTPIP1O43586 416 aa11.08□□□□□ -0.64
SYNPO2-201ENST00000307142 ZNF200P98182 395 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms