RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 MIB1Q86YT6 1006 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 ETFBKMTQ8IXQ9 262 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 ZCCHC9Q8N567 271 aaKnown RBP12.65□□□□□ -0.38
SMIM4-201ENST00000307106 TERB1Q8NA31 727 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 SPATA17Q96L03 361 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 MMTAG2Q9BU76 263 aaKnown RBP12.65□□□□□ -0.38
SMIM4-201ENST00000307106 FOXP1Q9H334 677 aaPredicted RBP12.65□□□□□ -0.38
SMIM4-201ENST00000307106 KCND2Q9NZV8 630 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 DEC1Q9P2X7 70 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 HCN2Q9UL51 889 aa12.65□□□□□ -0.38
SMIM4-201ENST00000307106 FNDC3AQ9Y2H6 1198 aaKnown RBP12.65□□□□□ -0.38
SMIM4-201ENST00000307106 COL5A1P20908 1838 aaPredicted RBP12.65□□□□□ -0.39
SMIM4-201ENST00000307106 ZNF840PA6NDX5 716 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 E9PAM4 449 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 HCRTO43612 131 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 ABL1P00519 1130 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
SMIM4-201ENST00000307106 MAGEA11P43364 429 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 TRAPPC10P48553 1259 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 EGFLAMQ63HQ2 1017 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 ADALQ6DHV7 355 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 SDE2Q6IQ49 451 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 IL27RAQ6UWB1 636 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 DBX2Q6ZNG2 339 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 LRRC69Q6ZNQ3 347 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 OSTM1Q86WC4 334 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 DDX42Q86XP3 938 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMIM4-201ENST00000307106 CHPFQ8IZ52 775 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 DNASE2BQ8WZ79 361 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 FCRL3Q96P31 734 aaPredicted RBP12.64□□□□□ -0.39
SMIM4-201ENST00000307106 ACOX2Q99424 681 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 MIR1-1HGQ9H1L0 117 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 CD248Q9HCU0 757 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 NOL7Q9UMY1 257 aaKnown RBP12.64□□□□□ -0.39
SMIM4-201ENST00000307106 STARD13Q9Y3M8 1113 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 CFAP46Q8IYW2 2715 aa12.64□□□□□ -0.39
SMIM4-201ENST00000307106 PLXNA2O75051 1894 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 ANKRD63C9JTQ0 380 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 HOXC11O43248 304 aaPredicted RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 OAS1P00973 400 aaKnown RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 ITGB3P05106 788 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 HLA-EP13747 358 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 SCP2P22307 547 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 PCSK1P29120 753 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 CD6P30203 668 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 POLR2BP30876 1174 aaKnown RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 GRIK1P39086 918 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 EIF2S3P41091 472 aaKnown RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 PPP3CCP48454 512 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 IL17AQ16552 155 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 HLA-BQ31612 363 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 CCDC157Q569K6 752 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 FAM171BQ6P995 826 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 KIAA1324Q6UXG2 1013 aaKnown RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 NT5DC4Q86YG4 428 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 ADGRF2Q8IZF7 708 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 C8orf76Q96K31 380 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 MRGPRX1Q96LB2 322 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 CEP295NLQ96MC4 621 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 PLIN2Q99541 437 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 TTLL2Q9BWV7 592 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 EHD2Q9NZN4 543 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 MAGEC2Q9UBF1 373 aaPredicted RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 AGO2Q9UKV8 859 aaKnown RBP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 ODF2LQ9ULJ1 636 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMIM4-201ENST00000307106 AGAP1Q9UPQ3 857 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 BTBD3Q9Y2F9 522 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 NFE2L3Q9Y4A8 694 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 PCDHGB2Q9Y5G2 931 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 RAD54BQ9Y620 910 aa12.63□□□□□ -0.39
SMIM4-201ENST00000307106 E2F8A0AVK6 867 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 TISP43B9A030 160 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 TULP1O00294 542 aaPredicted RBP12.62□□□□□ -0.39
SMIM4-201ENST00000307106 PLK4O00444 970 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 GABRDO14764 452 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 TRIM24O15164 1050 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 BCAT2O15382 392 aaPredicted RBP12.62□□□□□ -0.39
SMIM4-201ENST00000307106 ATP2C2O75185 946 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 NCAM1P13591 858 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 BDNFP23560 247 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 ANXA13P27216 316 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 LHX1P48742 406 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 BNC1Q01954 994 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 CFHR1Q03591 330 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 GNL2Q13823 731 aaKnown RBP12.62□□□□□ -0.39
SMIM4-201ENST00000307106 ANO4Q32M45 955 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 HYIQ5T013 277 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 MYCT1Q8N699 235 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms