RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 MAP7Q14244 749 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 MAPRE1Q15691 268 aaKnown RBP11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 TBCCQ15814 346 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 TRIM68Q6AZZ1 485 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 CKAP2Q8WWK9 683 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 CLMNQ96JQ2 1002 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 TRPV6Q9H1D0 765 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 NEUROG2Q9H2A3 272 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 TRIM49D1C9J1S8 452 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZNF286BP0CG31 522 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 RFC1P35251 1148 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 SH3BGRP55822 239 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 SMYD2Q9NRG4 433 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 FZD9O00144 591 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 USP2O75604 605 aaPredicted RBP11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 ERBB2P04626 1255 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 RGS2P41220 211 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 FIZ1Q96SL8 496 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 RRN3Q9NYV6 651 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 LRFN2Q9ULH4 789 aa11.32□□□□□ -0.6
PCDHGC4-201ENST00000306593 HACD1B0YJ81 288 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 DNAJC8O75937 253 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 RARBP10826 455 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 NCF2P19878 526 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 CDH8P55286 799 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 SEPT6Q14141 434 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 DRICH1Q6PGQ1 229 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 KIRREL3Q8IZU9 778 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 LMO3Q8TAP4 145 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 E2F7Q96AV8 911 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 TLCD1Q96CP7 247 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 STRA6Q9BX79 667 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 TRDMT1O14717 391 aaKnown RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 CHADO15335 359 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 NCAM2O15394 837 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 EDIL3O43854 480 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 NFICP08651 508 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 RPSAP08865 295 aaKnown RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 NQO1P15559 274 aaKnown RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 LHX1P48742 406 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 RPS6KA2Q15349 733 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 DNAL1Q4LDG9 190 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 ACAD11Q709F0 780 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 GJB6O95452 261 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 CALCAP01258 141 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 DRD4P21917 467 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 CYP2F1P24903 491 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 STX1BP61266 288 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 RPL7AP62424 266 aaKnown RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 B3GNT9Q6UX72 402 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 SLC7A14Q8TBB6 771 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 IGF2BP3O00425 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZNF135P52742 658 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 POU5F1BQ06416 359 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 ANO4Q32M45 955 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 TTC27Q6P3X3 843 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 LINC00523Q86TU6 105 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 NKD2Q969F2 451 aaPredicted RBP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 BRD8Q9H0E9 1235 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZFYVE28Q9HCC9 887 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 GGT7Q9UJ14 662 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 STYXL1Q9Y6J8 313 aa11.31□□□□□ -0.6
PCDHGC4-201ENST00000306593 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 CCDC195A0A1B0GUA6 201 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 NFKBIEO00221 500 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 TRUB2O95900 331 aaKnown RBP11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 APOEP02649 317 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 GRM5P41594 1212 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 SERPINB4P48594 390 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 TSTA3Q13630 321 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 DPYSL3Q14195 570 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 NDUFAF2Q8N183 169 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 PPTC7Q8NI37 304 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 TMEM174Q8WUU8 243 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 MRGBPQ9NV56 204 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 PCMTD2Q9NV79 361 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 TMEM51Q9NW97 253 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 NDE1Q9NXR1 346 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 GRHL1Q9NZI5 618 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 NRCAMQ92823 1304 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 DDX60LQ5H9U9 1706 aaKnown RBP11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 ALOX15BO15296 676 aa11.3□□□□□ -0.6
PCDHGC4-201ENST00000306593 C6orf222P0C671 652 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms