RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 ANAPC1Q9H1A4 1944 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ZSCAN9O15535 394 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 B4GALT4O60513 344 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 MAFO75444 373 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 PYGLP06737 847 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 GSTA2P09210 222 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 INHBBP09529 407 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 SBK3P0C264 359 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TGFB3P10600 412 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 YBX3P16989 372 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS50-202ENST00000305866 PCSK6P29122 969 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DPP6P42658 865 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CACNA2D1P54289 1103 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 NIPAL4Q0D2K0 466 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DMP1Q13316 513 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 CUL2Q13617 745 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 FRG1Q14331 258 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 ZNF423Q2M1K9 1284 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 STEAP4Q687X5 459 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CIAPIN1Q6FI81 312 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 SPOPLQ6IQ16 392 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ZNF449Q6P9G9 518 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TSHZ1Q6ZSZ6 1077 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 BRSK2Q8IWQ3 736 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 UNC45BQ8IWX7 931 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 RHOT1Q8IXI2 618 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 KLHDC8BQ8IXV7 354 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 EXOC8Q8IYI6 725 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TTLL6Q8N841 843 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 C7orf31Q8N865 590 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 HMGCLL1Q8TB92 370 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PAFAH2Q99487 392 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 KIFC3Q9BVG8 833 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 SYNCQ9H7C4 482 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 C10orf88Q9H8K7 445 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 NPHS2Q9NP85 383 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DMAP1Q9NPF5 467 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 METTL5Q9NRN9 209 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 PSMC3IPQ9P2W1 217 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 PLLPQ9Y342 182 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 SCN8AQ9UQD0 1980 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DNAJC25-GNG10A0A024R161 153 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 A0A1B0GTW7 788 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 FAM237BA0A1B0GVD1 139 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TCRBV9S1A1TA0A576 114 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DPYSL4O14531 572 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PEX1O43933 1283 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 UGT1A9O60656 530 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 MSCO60682 206 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TOMM70O94826 608 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PFKMP08237 780 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 PYGBP11216 843 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CYP3A5P20815 502 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 SCNN1AP37088 669 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ASPAP45381 313 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CLCN2P51788 898 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 NOP14P78316 857 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 IL9RQ01113 521 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 NSUN2Q08J23 767 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS50-202ENST00000305866 OVGP1Q12889 678 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 BIRC2Q13490 618 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 IRF5Q13568 498 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TNFAIP1Q13829 316 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TMED2Q15363 201 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 TAF5Q15542 800 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 STXBP5Q5T5C0 1151 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 RIPOR1Q6ZS17 1223 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ACAD11Q709F0 780 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ILDR2Q71H61 639 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 ULK2Q8IYT8 1036 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 MARVELD2Q8N4S9 558 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 STKLD1Q8NE28 680 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 EMID1Q96A84 441 aaPredicted RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 APOPT1Q96IL0 206 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 NSL1Q96IY1 281 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 IFT74Q96LB3 600 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 UGT1A7Q9HAW7 530 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 UGT1A10Q9HAW8 530 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 UGT1A8Q9HAW9 530 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 MRPL47Q9HD33 250 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 MOCS1Q9NZB8 636 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 DLGAP2Q9P1A6 1054 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 HEY2Q9UBP5 337 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 RIMS3Q9UJD0 308 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 CPSF3Q9UKF6 684 aaKnown RBP5.69□□□□□ -1.5
VPS50-202ENST00000305866 BRCA2P51587 3418 aa5.69□□□□□ -1.5
VPS50-202ENST00000305866 RBM47A0AV96 593 aaKnown RBP5.68□□□□□ -1.5
VPS50-202ENST00000305866 FAM159BA6NKW6 160 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 SOCS7O14512 581 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 LRCH4O75427 683 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 OR6B1O95007 311 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 TOP3BO95985 862 aaKnown RBP5.68□□□□□ -1.5
VPS50-202ENST00000305866 ERBB2P04626 1255 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 ATP5BP06576 529 aaKnown RBP5.68□□□□□ -1.5
VPS50-202ENST00000305866 ATF2P15336 505 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 CD58P19256 250 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 STX2P32856 288 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 PIK3CAP42336 1068 aa5.68□□□□□ -1.5
VPS50-202ENST00000305866 SOX10P56693 466 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms