RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 BTNL9Q6UXG8 535 aa8.08□□□□□ -1.12
SCN9A-201ENST00000303354 GTF3C2Q8WUA4 911 aaPredicted RBP8.08□□□□□ -1.12
SCN9A-201ENST00000303354 NACC2Q96BF6 587 aa8.08□□□□□ -1.12
SCN9A-201ENST00000303354 TRABDQ9H4I3 376 aa8.08□□□□□ -1.12
SCN9A-201ENST00000303354 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.08□□□□□ -1.12
SCN9A-201ENST00000303354 RPS6KB2Q9UBS0 482 aa8.08□□□□□ -1.12
SCN9A-201ENST00000303354 PSMD12O00232 456 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 FOXN3O00409 490 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 GSTM1P09488 218 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 KRT4P19013 534 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 SERPINB5P36952 375 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RABGAP1LQ5R372 815 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RASAL3Q86YV0 1011 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 ATL2Q8NHH9 583 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 ANGPTL2Q9UKU9 493 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PCDHB9Q9Y5E1 797 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 OR4Q2P0C623 313 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 STIP1P31948 543 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 GUCY1A3Q02108 690 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 MAB21L3Q8N8X9 362 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RBM15Q96T37 977 aaKnown RBP eCLIP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PFDN1O60925 122 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 FAM84AQ96KN4 292 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 XPO6Q96QU8 1125 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 SYT15Q9BQS2 421 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 OSBPL8Q9BZF1 889 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 DYRK1BQ9Y463 629 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RBP3P10745 1247 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 SKIP12755 728 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 AMPD1P23109 780 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CYP2F1P24903 491 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 DDR1Q08345 913 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PDIA5Q14554 519 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 E2F4Q16254 413 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PPP1R26Q5T8A7 1209 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 IRAK1BP1Q5VVH5 260 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 IYDQ6PHW0 289 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 USP50Q70EL3 339 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 THUMPD3Q9BV44 507 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RSAD1Q9HA92 442 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 ATP13A1Q9HD20 1204 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 TXLNGQ9NUQ3 528 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 KRT87PA6NCN2 255 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 OGTO15294 1046 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 INPP4BO15327 924 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 ABCG1P45844 678 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 TRPC1P48995 793 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 HIRAP54198 1017 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CBWD3Q5JTY5 395 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CBWD5Q5RIA9 395 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PHF21AQ96BD5 680 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 TMEM176AQ96HP8 235 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 EXOC2Q96KP1 924 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 TMEM121Q9BTD3 319 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PACSIN1Q9BY11 444 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PKD2L2Q9NZM6 624 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 MRPS23Q9Y3D9 190 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 GNG14A0A1W2PPG7 69 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 FFAR2O15552 330 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RPA1P27694 616 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CTCFP49711 727 aaPredicted RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PRKAG1P54619 331 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 HTRA3P83110 453 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 PLEKHA8Q96JA3 519 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CCDC151A5D8V7 595 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CFAP99D6REC4 459 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 CAND2O75155 1236 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 NFICP08651 508 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 SLC28A3Q9HAS3 691 aa8.07□□□□□ -1.12
SCN9A-201ENST00000303354 EXOSC4Q9NPD3 245 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 RNF17Q9BXT8 1623 aaKnown RBP8.07□□□□□ -1.12
SCN9A-201ENST00000303354 A6NNZ2 444 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PLA2G6O60733 806 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CTDNEP1O95476 244 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TUBP50607 506 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TBX4P57082 545 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 BYSLQ13895 437 aaKnown RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TUBB8Q3ZCM7 444 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 ACAD10Q6JQN1 1059 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SYTL1Q8IYJ3 562 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 RXFP2Q8WXD0 754 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TBL1XO60907 577 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 IL1BP01584 269 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 TFE3P19532 575 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 RABL6Q3YEC7 729 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SCARA3Q6AZY7 606 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SARM1Q6SZW1 724 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 FIBCD1Q8N539 461 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 PDCD2LQ9BRP1 358 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 SH3BP4Q9P0V3 963 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 NCOA3Q9Y6Q9 1424 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CCR4P51679 360 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 CCDC142Q17RM4 750 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 FBXO38Q6PIJ6 1188 aa8.06□□□□□ -1.12
SCN9A-201ENST00000303354 OTUB1Q96FW1 271 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 322.1 ms