RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 CHMP2BQ9UQN3 213 aa9.71□□□□□ -0.85
UBLCP1-201ENST00000296786 NPTXRO95502 500 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 STIP1P31948 543 aaKnown RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 GRM5P41594 1212 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 RNASELQ05823 741 aaKnown RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 BNIP1Q12981 228 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 ACVR2BQ13705 512 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 TFDP2Q14188 446 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 KRT81Q14533 505 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 KIZQ2M2Z5 673 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 KLHL38Q2WGJ6 581 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 FAM47CQ5HY64 1035 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 RNF43Q68DV7 783 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 SCYL2Q6P3W7 929 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 C1orf228Q6PIY5 440 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 OLFML1Q6UWY5 402 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 ACOT1Q86TX2 421 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 TTC30AQ86WT1 665 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 ECHDC2Q86YB7 292 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 THOC1Q96FV9 657 aaKnown RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 ZMAT2Q96NC0 199 aaKnown RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 RNF157Q96PX1 679 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 MRPL45Q9BRJ2 306 aaKnown RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 DHRS4Q9BTZ2 278 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 SLCO1B3Q9NPD5 702 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 NGRNQ9NPE2 291 aaKnown RBP9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 FAM49BQ9NUQ9 324 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 GPATCH2LQ9NWQ4 482 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 GINS2Q9Y248 185 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 STARD13Q9Y3M8 1113 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.86
UBLCP1-201ENST00000296786 SCN4AP35499 1836 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ZNF236Q9UL36 1845 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 CFAP73A6NFT4 308 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 H7C0C1 242 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 CHUKO15111 745 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SNAI1O95863 264 aaPredicted RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 IL4RP24394 825 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 EPHX2P34913 555 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ELK3P41970 407 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ATP5OP48047 213 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 KCNJ11Q14654 390 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 STILQ15468 1287 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 PKDCCQ504Y2 493 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ZC3H12AQ5D1E8 599 aaKnown RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 LVRNQ6Q4G3 990 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 RGS9BPQ6ZS82 235 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ZNF410Q86VK4 478 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 FAM228AQ86W67 206 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 IGDCC3Q8IVU1 814 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 MAP7D3Q8IWC1 876 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SCUBE3Q8IX30 993 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 MZB1Q8WU39 189 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 FAM172AQ8WUF8 416 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 DCAKDQ8WVC6 231 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SNTG2Q9NY99 539 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 NME7Q9Y5B8 376 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 PDHXO00330 501 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ZWINTO95229 277 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 MMP3P08254 477 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 FGFR1P11362 822 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ATP2A2P16615 1042 aaKnown RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SDC4P31431 198 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 MSH2P43246 934 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 KCNJ2P63252 427 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 PDK2Q15119 407 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 DCAF4L1Q3SXM0 396 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SWT1Q5T5J6 900 aaKnown RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 LDLRAD1Q5T700 205 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 HHATQ5VTY9 493 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 C9orf131Q5VYM1 1079 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 PLD5Q8N7P1 536 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 LRRC8CQ8TDW0 803 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 GTF3C2Q8WUA4 911 aaPredicted RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SLC10A4Q96EP9 437 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 USP29Q9HBJ7 922 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 SSU72Q9NP77 194 aaKnown RBP9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 TUBGCP4Q9UGJ1 667 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 HES2Q9Y543 173 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 HEY1Q9Y5J3 304 aa9.7□□□□□ -0.86
UBLCP1-201ENST00000296786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 KBTBD13C9JR72 458 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 GOLGA8RI6L899 631 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 DPYSL4O14531 572 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 KCNN4O15554 427 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 PAPSS1O43252 624 aaPredicted RBP9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 EDF1O60869 148 aaKnown RBP9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 AVILO75366 819 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 MAP3K6O95382 1288 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 NQO1P15559 274 aaKnown RBP9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 SMPD1P17405 629 aa9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 HOXA11P31270 313 aaPredicted RBP9.69□□□□□ -0.86
UBLCP1-201ENST00000296786 GBP2P32456 591 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms