RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 MMP19Q99542 508 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 TSSK1BQ9BXA7 367 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 MIS12Q9H081 205 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 APOBEC3GQ9HC16 384 aaKnown RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 NRBP2Q9NSY0 501 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 PPM1HQ9ULR3 514 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 AGTPBP1Q9UPW5 1226 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 CIB2O75838 187 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 ASLP04424 464 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 ITGA2BP08514 1039 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 NAMPTP43490 491 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 CLCN3P51790 818 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 AP2B1P63010 937 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 CDK16Q00536 496 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 DPY19L2Q6NUT2 758 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 TMEM270Q6UE05 265 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 RAPH1Q70E73 1250 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 RASSF3Q86WH2 238 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 DDX1Q92499 740 aaKnown RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 PPP2R3CQ969Q6 453 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 LENG1Q96BZ8 264 aaPredicted RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
CAGE1-201ENST00000296742 THTPAQ9BU02 230 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 SLC17A7Q9P2U7 560 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
CAGE1-201ENST00000296742 CCDC160A6NGH7 325 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 FCHO1O14526 889 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 B4GALT5O43286 388 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 ZSCAN5DPP0CG00 497 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 GRIA2P42262 883 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 SLC18A1P54219 525 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 NOP14P78316 857 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 KDSRQ06136 332 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 TARBP2Q15633 366 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 C1orf146Q5VVC0 180 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 ZCCHC9Q8N567 271 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 SMC1BQ8NDV3 1235 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 STKLD1Q8NE28 680 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 CCDC110Q8TBZ0 833 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 SKA1Q96BD8 255 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 GPR20Q99678 358 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 NMUR2Q9GZQ4 415 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 GTF3C4Q9UKN8 822 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 BANF1O75531 89 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 PGM3O95394 542 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 C4BPAP04003 597 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 CYP1A2P05177 515 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 MYL2P10916 166 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 CD58P19256 250 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 MTM1Q13496 603 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 EFTUD2Q15029 972 aaKnown RBP eCLIP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 RASA2Q15283 850 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 ZACNQ401N2 412 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 WDR44Q5JSH3 913 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 MAP1SQ66K74 1059 aaPredicted RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 ISLR2Q6UXK2 745 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 ALYREFQ86V81 257 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 ANKMY2Q8IV38 441 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 GLIS1Q8NBF1 620 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 PANX3Q96QZ0 392 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 NIFKQ9BYG3 293 aaKnown RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 PSMC3IPQ9P2W1 217 aaPredicted RBP13.01□□□□□ -0.33
CAGE1-201ENST00000296742 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 EVPLQ92817 2033 aa13.01□□□□□ -0.33
CAGE1-201ENST00000296742 GOLGA8SH3BPF8 625 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 GOLGA8MH3BSY2 632 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 TXNDC9O14530 226 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 PABPC4LP0CB38 370 aaKnown RBP13□□□□□ -0.33
CAGE1-201ENST00000296742 GZMAP12544 262 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 TMEM62Q0P6H9 643 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 LAMTOR4Q0VGL1 99 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 USP37Q86T82 979 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 SCUBE1Q8IWY4 988 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 PHACTR1Q9C0D0 580 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 RNPEPQ9H4A4 650 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 UVRAGQ9P2Y5 699 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 NUB1Q9Y5A7 615 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
CAGE1-201ENST00000296742 A0A0B4J269 797 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 ZBTB42B2RXF5 422 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 ADCY3O60266 1144 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 CRABP2P29373 138 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 ARL4CP56559 192 aa13□□□□□ -0.33
CAGE1-201ENST00000296742 PDIA2Q13087 525 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms