RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SNX27Q96L92 541 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 TGS1Q96RS0 853 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 CNPY3Q9BT09 278 aa12.31□□□□□ -0.44
RHO-201ENST00000296271 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
RHO-201ENST00000296271 CCT8L1PA6NM43 557 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 A8MXQ7 604 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 H7C0C1 242 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 APOC4-APOC2K7ER74 178 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 APOC2P02655 101 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 CYP2C9P11712 490 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 STX2P32856 288 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ATP5OP48047 213 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 MGAT5Q09328 741 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
RHO-201ENST00000296271 PKDCCQ504Y2 493 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PYROXD2Q8N2H3 581 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PLD5Q8N7P1 536 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 RMDN2Q96LZ7 410 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
RHO-201ENST00000296271 TRABDQ9H4I3 376 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 CCDC134Q9H6E4 229 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
RHO-201ENST00000296271 ASNSD1Q9NWL6 643 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 WDR35Q9P2L0 1181 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
RHO-201ENST00000296271 WDR91A4D1P6 747 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 CLDN5O00501 218 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 FAM155BO75949 473 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 P4HA1P13674 534 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ACAT1P24752 427 aaKnown RBP12.3□□□□□ -0.44
RHO-201ENST00000296271 RBL1P28749 1068 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 HDAC4P56524 1084 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 DNAJC3Q13217 504 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ZBTB6Q15916 424 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 CENPUQ71F23 418 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 PYROXD1Q8WU10 500 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 KBTBD7Q8WVZ9 684 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ABHD16BQ9H3Z7 469 aa12.3□□□□□ -0.44
RHO-201ENST00000296271 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
RHO-201ENST00000296271 SYNJ2BP-COX16A0A087WUM0 186 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 TAC1P20366 129 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 TKTP29401 623 aaKnown RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 GTF2A2P52657 109 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 KRT81Q14533 505 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 C9orf57Q5W0N0 161 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SLC27A1Q6PCB7 646 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 CROCCP2Q86T23 111 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SPATS2Q86XZ4 545 aaKnown RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 HOMEZQ8IX15 550 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 PPIL6Q8IXY8 311 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SLC35F5Q8WV83 523 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 TRIM6Q9C030 488 aaPredicted RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 USP29Q9HBJ7 922 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
RHO-201ENST00000296271 COX16Q9P0S2 106 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SAMD15Q9P1V8 674 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 MORF4L1Q9UBU8 362 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SHOC2Q9UQ13 582 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 MCF2LO15068 1137 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 KCNN4O15554 427 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 STRNO43815 780 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 BEST1O76090 585 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 ENDOD1O94919 500 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 UBOX5O94941 541 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 CELF2O95319 508 aaKnown RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 ELK3P41970 407 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SLC10A2Q12908 348 aaPredicted RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 GPR162Q16538 588 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 PRPF39Q86UA1 669 aaKnown RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 CCDC110Q8TBZ0 833 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 P3H4Q92791 437 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 RNF157Q96PX1 679 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 CCDC77Q9BR77 488 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 PCDH18Q9HCL0 1135 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 ETNK2Q9NVF9 386 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 PIH1D1Q9NWS0 290 aaKnown RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 ATXN2Q99700 1313 aaKnown RBP12.29□□□□□ -0.44
RHO-201ENST00000296271 COL1A2P08123 1366 aa12.29□□□□□ -0.44
RHO-201ENST00000296271 SMIM28A0A1B0GU29 152 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 OAS1P00973 400 aaKnown RBP12.28□□□□□ -0.44
RHO-201ENST00000296271 KRT4P19013 534 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 CYP2B6P20813 491 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 GRIA1P42261 906 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 GSCP56915 257 aaPredicted RBP12.28□□□□□ -0.44
RHO-201ENST00000296271 GBE1Q04446 702 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 NOMO1Q15155 1222 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 CNPY4Q8N129 248 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 ANKLE1Q8NAG6 615 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 SLC2A14Q8TDB8 520 aa12.28□□□□□ -0.44
RHO-201ENST00000296271 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms