RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SPDYAQ5MJ70 313 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 FIBCD1Q8N539 461 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 EMC1Q8N766 993 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 GMNCA6NCL1 334 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 USP2O75604 605 aaPredicted RBP18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 TEDDM1Q5T9Z0 273 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 DCLK3Q9C098 648 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 ITM2BQ9Y287 266 aa18.35■□□□□ 0.53
CDC42EP3-201ENST00000295324 VCLP18206 1134 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 CRYBB1P53674 252 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZBTB41Q5SVQ8 909 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 RPAINQ86UA6 219 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 EDEM1Q92611 657 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SF3B1O75533 1304 aaKnown RBP eCLIP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SUPT3HB4E1H0 165 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SUPT3HO75486 399 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 INPP1P49441 399 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 LRRC14Q15048 493 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 LBX2Q6XYB7 198 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLC2A14Q8TDB8 520 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 MTBPQ96DY7 904 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 NAT9Q9BTE0 207 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 MLH1P40692 756 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 AARSP49588 968 aaKnown RBP eCLIP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 NECAB2Q7Z6G3 386 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SNX31Q8N9S9 440 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 ADGRE3Q9BY15 652 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 CHUKO15111 745 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 HSP90AA5PQ58FG0 334 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 BEND6Q5SZJ8 279 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 KRT80Q6KB66 452 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 KIAA0319LQ8IZA0 1049 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 ZNF557Q8N988 423 aaPredicted RBP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 EXD1Q8NHP7 514 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 VCPIP1Q96JH7 1222 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 MAF1Q9H063 256 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 USP20Q9Y2K6 914 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 RAD51CO43502 376 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 TADA3O75528 432 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 ITGALP20701 1170 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 RENBPP51606 427 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 NOMO2Q5JPE7 1267 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 AGR3Q8TD06 166 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 PURBQ96QR8 312 aaKnown RBP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 SMPD4Q9NXE4 827 aa18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 TRMT6Q9UJA5 497 aaKnown RBP18.34■□□□□ 0.53
CDC42EP3-201ENST00000295324 FAM47DPA6NHR8 397 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 SLURP2P0DP57 97 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 MYL2P10916 166 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 TGM2P21980 687 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 HDAC4P56524 1084 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 UNC93AQ86WB7 457 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 PDGFCQ9NRA1 345 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 LOC102724159A0A0B4J2E5 919 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 FRMD3A2A2Y4 597 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 SMIM22K7EJ46 135 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 KRT4P19013 534 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 VSNL1P62760 191 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 PWP2Q15269 919 aaKnown RBP18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 HIBCHQ6NVY1 386 aaPredicted RBP18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 APOL5Q9BWW9 433 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 THEGQ9P2T0 379 aa18.33■□□□□ 0.53
CDC42EP3-201ENST00000295324 A0A0A6YYK5 440 aaPredicted RBP18.33■□□□□ 0.52
CDC42EP3-201ENST00000295324 SLC20A1Q8WUM9 679 aa18.33■□□□□ 0.52
CDC42EP3-201ENST00000295324 PFDN1O60925 122 aa18.33■□□□□ 0.52
CDC42EP3-201ENST00000295324 ENDOD1O94919 500 aa18.33■□□□□ 0.52
CDC42EP3-201ENST00000295324 PCMTD2Q9NV79 361 aa18.33■□□□□ 0.52
CDC42EP3-201ENST00000295324 RPS6KL1Q9Y6S9 549 aa18.33■□□□□ 0.52
CDC42EP3-201ENST00000295324 RAMP2O60895 175 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 CRTAMO95727 393 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 JCHAINP01591 159 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 PPM1AP35813 382 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 STX3Q13277 289 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 KYNUQ16719 465 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 GRID1Q9ULK0 1009 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 LRRIQ3A6PVS8 624 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 HIST2H2ACQ16777 129 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 HIST2H2AA3Q6FI13 130 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 DENND5BQ6ZUT9 1274 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 PPTC7Q8NI37 304 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 CSGALNACT1Q8TDX6 532 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ADA2Q9NZK5 511 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ANKRD63C9JTQ0 380 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ALDH1A2O94788 518 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 OTUD4Q01804 1114 aaKnown RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 SPDYE7PQ495Y7 208 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 LRIG3Q6UXM1 1119 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 IL31RAQ8NI17 732 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ROPN1BQ9BZX4 212 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ROPN1Q9HAT0 212 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 EFCAB14O75071 495 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 DNAJC8O75937 253 aaPredicted RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 ITGB5P18084 799 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 CTNNB1P35222 781 aa18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 RBM43Q6ZSC3 357 aaKnown RBP18.32■□□□□ 0.52
CDC42EP3-201ENST00000295324 RRM2BQ7LG56 351 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms