RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 AADACL2Q6P093 401 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 TMC7Q7Z402 723 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ZDHHC17Q8IUH5 632 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 DEFB106AQ8N104 65 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 ALG3Q92685 438 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.56e-10■■■□□ 17.2
XRCC4-201ENST00000282268 UBE2OQ9C0C9 1292 aaKnown RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 CYLDQ9NQC7 956 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 MRPL17Q9NRX2 175 aaKnown RBP11.94□□□□□ -0.5
XRCC4-201ENST00000282268 BACE2Q9Y5Z0 518 aa11.94□□□□□ -0.5
XRCC4-201ENST00000282268 LINC01553A4QN01 128 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 C2CD4BA6NLJ0 364 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 YJEFN3A6XGL0 299 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 E7ENQ6 273 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CAPN9O14815 690 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 TRIM66O15016 1216 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 FBXO21O94952 628 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CXCL14O95715 111 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CA3P07451 260 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 SPATA31D3P0C874 917 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 SDC4P31431 198 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 BMPR1AP36894 532 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 ZNF143P52747 638 aaPredicted RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 DAOAP59103 153 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CCDC14Q49A88 953 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CFAP221Q4G0U5 840 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 ATP13A4Q4VNC1 1196 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 DCAF6Q58WW2 860 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 RAB41Q5JT25 222 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 EFHC1Q5JVL4 640 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 PLPP4Q5VZY2 271 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 SCYL2Q6P3W7 929 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 SPATA31D4Q6ZUB0 917 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 ADAT2Q7Z6V5 191 aaKnown RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 EDEM1Q92611 657 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CLP1Q92989 425 aaKnown RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 FUBP3Q96I24 572 aaKnown RBP eCLIP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 UBXN6Q9BZV1 441 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 NGRNQ9NPE2 291 aaKnown RBP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 ENTPD7Q9NQZ7 604 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.93□□□□□ -0.5
XRCC4-201ENST00000282268 NAALADL1Q9UQQ1 740 aa11.93□□□□□ -0.5
XRCC4-201ENST00000282268 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 MIF4GDA9UHW6 222 aaKnown RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 PI4K2BG5E9Z4 385 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 RNF8O76064 485 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 SEC24AO95486 1093 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 HAPLN1P10915 354 aaPredicted RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 CTNNA1P35221 906 aaKnown RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 SULT1E1P49888 294 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 ATXN1P54253 815 aaKnown RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 YWHAZP63104 245 aaKnown RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 MTMR3Q13615 1198 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 WHAMMP3Q1A5X7 153 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 SMTNL2Q2TAL5 461 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 DCAF12L1Q5VU92 463 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 SLC8B1Q6J4K2 584 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 VSTM1Q6UX27 236 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 SLC26A9Q7LBE3 791 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 RHOT1Q8IXI2 618 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 ADAM32Q8TC27 787 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 SPPL2BQ8TCT7 592 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 MICAL1Q8TDZ2 1067 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 FAM172AQ8WUF8 416 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 GOLGA1Q92805 767 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 CD101Q93033 1021 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 PBKQ96KB5 322 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 CNPY3Q9BT09 278 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 OXCT2Q9BYC2 517 aaPredicted RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 L2HGDHQ9H9P8 463 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 CNGB3Q9NQW8 809 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 MAGED2Q9UNF1 606 aaPredicted RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
XRCC4-201ENST00000282268 KIAA1671Q9BY89 1806 aa11.92□□□□□ -0.5
XRCC4-201ENST00000282268 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PDE2AO00408 941 aaPredicted RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 HSF2BPO75031 334 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 DAB1O75553 588 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 SLU7O95391 586 aaKnown RBP11.91□□□□□ -0.5
XRCC4-201ENST00000282268 LTFP02788 710 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PYGMP11217 842 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 NCAM1P13591 858 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 CTNNA2P26232 953 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 MAN1A1P33908 653 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PBX2P40425 430 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 PAFAH1B1P43034 410 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 MAGEA11P43364 429 aa11.91□□□□□ -0.5
XRCC4-201ENST00000282268 RWDD2BP57060 319 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms