RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PRPHP41219 470 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 CD151P48509 253 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 CTCFP49711 727 aaPredicted RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 IRX3P78415 501 aaPredicted RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 IL1RL1Q01638 556 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 PPARDQ03181 441 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 TFCP2Q12800 502 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 PPA1Q15181 289 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 DLGAP5Q15398 846 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 TIGD6Q17RP2 521 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 KLHDC7AQ5VTJ3 777 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 ACAD10Q6JQN1 1059 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 TRMT10BQ6PF06 316 aaKnown RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 IL27RAQ6UWB1 636 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 OTOP1Q7RTM1 612 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 RPAP2Q8IXW5 612 aaPredicted RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 NGEFQ8N5V2 710 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 HIPK4Q8NE63 616 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 PPP1R14CQ8TAE6 165 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 KLHDC4Q8TBB5 520 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 STT3BQ8TCJ2 826 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 RUBCNQ92622 972 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 MUL1Q969V5 352 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 ZNF566Q969W8 418 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 C18orf8Q96DM3 657 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 NOX5Q96PH1 765 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 SLC2A13Q96QE2 648 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 PIGSQ96S52 555 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 BOCQ9BWV1 1114 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 TMEM168Q9H0V1 697 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 KCTD10Q9H3F6 313 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 BARX1Q9HBU1 254 aaPredicted RBP4.98□□□□□ -1.61
CD44-202ENST00000278385 PARD6AQ9NPB6 346 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 KCND1Q9NSA2 647 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 TMEM160Q9NX00 188 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 HOXC10Q9NYD6 342 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 CTNNA3Q9UI47 895 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 SH3BGRL2Q9UJC5 107 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 RPS6KA6Q9UK32 745 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 FAM184BQ9ULE4 1060 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 SLC39A10Q9ULF5 831 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 CBLCQ9ULV8 474 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 DUSP12Q9UNI6 340 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 STXBP5LQ9Y2K9 1186 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 SNX8Q9Y5X2 465 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 MAP3K5Q99683 1374 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 MYOM1P52179 1685 aa4.98□□□□□ -1.61
CD44-202ENST00000278385 WNK3Q9BYP7 1800 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ZNF561-AS1K7EIQ3 104 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 MAN2B1O00754 1011 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 FFAR3O14843 346 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 RNMTO43148 476 aaKnown RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 KDM1AO60341 852 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 SRGAP2O75044 1071 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 RPS6KA4O75676 772 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 SLC22A3O75751 556 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ENDOD1O94919 500 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 CHGBP05060 677 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 NR2F1P10589 423 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 RARBP10826 455 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 EEF2P13639 858 aaKnown RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 KRT13P13646 458 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 OSMP13725 252 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 GLRBP48167 497 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 SLURP1P55000 103 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 HERVK_113P62684 666 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 IRF9Q00978 393 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 AKAP17AQ02040 695 aaKnown RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 MAP2K1Q02750 393 aaPredicted RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 ITPK1Q13572 414 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ACVR2BQ13705 512 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 TMEM132BQ14DG7 1078 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 WTAPQ15007 396 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 GPR162Q16538 588 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 SKIDA1Q1XH10 827 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 MTHFSDQ2M296 383 aaKnown RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 WSCD2Q2TBF2 565 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ADCK5Q3MIX3 580 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ZNF568Q3ZCX4 644 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 VWA3BQ502W6 1294 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 NAA16Q6N069 864 aaPredicted RBP4.97□□□□□ -1.61
CD44-202ENST00000278385 HHIPL2Q6UWX4 724 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 BTNL9Q6UXG8 535 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 FRMD7Q6ZUT3 714 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 NUP54Q7Z3B4 507 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 KCNK18Q7Z418 384 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 C1QL4Q86Z23 238 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 CCDC170Q8IYT3 715 aa4.97□□□□□ -1.61
CD44-202ENST00000278385 ZNF540Q8NDQ6 660 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms