RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 PACS2Q86VP3 889 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 BHMTQ93088 406 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 MYCBPQ99417 103 aaPredicted RBP14.9□□□□□ -0.02
TMEM47-201ENST00000275954 GTSE1Q9NYZ3 720 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 UBP1Q9NZI7 540 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 PCYOX1Q9UHG3 505 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 CFAP73A6NFT4 308 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 CD4P01730 458 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 GRAMD1BQ3KR37 738 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 MREGQ8N565 214 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 PPWD1Q96BP3 646 aaKnown RBP14.9□□□□□ -0.02
TMEM47-201ENST00000275954 VCPIP1Q96JH7 1222 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 L3MBTL3Q96JM7 780 aaPredicted RBP14.9□□□□□ -0.02
TMEM47-201ENST00000275954 MANSC1Q9H8J5 431 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 UBQLN1Q9UMX0 589 aaKnown RBP14.9□□□□□ -0.02
TMEM47-201ENST00000275954 C10orf71Q711Q0 1435 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
TMEM47-201ENST00000275954 LGALS2P05162 132 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 PCSK7Q16549 785 aa14.9□□□□□ -0.02
TMEM47-201ENST00000275954 BARX2Q9UMQ3 279 aaPredicted RBP14.9□□□□□ -0.02
TMEM47-201ENST00000275954 A0A0B4J269 797 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 KCNK1O00180 336 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 GMNNO75496 209 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 MX2P20592 715 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 CPT1AP50416 773 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 STX3Q13277 289 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 FASTKD1Q53R41 847 aaKnown RBP14.89□□□□□ -0.03
TMEM47-201ENST00000275954 LONP2Q86WA8 852 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 C3orf20Q8ND61 904 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 GBP5Q96PP8 586 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 EPAS1Q99814 870 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.89□□□□□ -0.03
TMEM47-201ENST00000275954 PYGBP11216 843 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 CHRNB2P17787 502 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 SLC26A2P50443 739 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 MAP2K5Q13163 448 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 CHI3L2Q15782 390 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 LRRC36Q1X8D7 754 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 RASIP1Q5U651 963 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 MTMR14Q8NCE2 650 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 JOSD2Q8TAC2 188 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 PLEKHO2Q8TD55 490 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 PABPC5Q96DU9 382 aaKnown RBP14.89□□□□□ -0.03
TMEM47-201ENST00000275954 PGM2Q96G03 612 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 RPS6KL1Q9Y6S9 549 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 CNTRLQ7Z7A1 2325 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 MYH8P13535 1937 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 AP1G2O75843 785 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 FARP2O94887 1054 aaPredicted RBP14.89□□□□□ -0.03
TMEM47-201ENST00000275954 TNFRSF8P28908 595 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 ART3Q13508 389 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 CELF3Q5SZQ8 465 aaKnown RBP14.89□□□□□ -0.03
TMEM47-201ENST00000275954 C12orf56Q8IXR9 622 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 ACO2Q99798 780 aaKnown RBP14.89□□□□□ -0.03
TMEM47-201ENST00000275954 PCDH9Q9HC56 1237 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 AP4E1Q9UPM8 1137 aa14.89□□□□□ -0.03
TMEM47-201ENST00000275954 C17orf102A2RUQ5 167 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ATP5HO75947 161 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ALDH1A1P00352 501 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ASS1P00966 412 aaKnown RBP14.88□□□□□ -0.03
TMEM47-201ENST00000275954 AMPD1P23109 780 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 CES3Q6UWW8 571 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 EDEM1Q92611 657 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 SGF29Q96ES7 293 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 VPS39Q96JC1 886 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 KIF9Q9HAQ2 790 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ARHGAP28Q9P2N2 729 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 HEY2Q9UBP5 337 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 IPO11Q9UI26 975 aaKnown RBP14.88□□□□□ -0.03
TMEM47-201ENST00000275954 TELO2Q9Y4R8 837 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 SOWAHBA6NEL2 793 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 FAM200BP0CF97 657 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 AKR1A1P14550 325 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 PGM1P36871 562 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ATXN3P54252 364 aaPredicted RBP14.88□□□□□ -0.03
TMEM47-201ENST00000275954 MAP3K7CLP57077 242 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 HABP4Q5JVS0 413 aaKnown RBP14.88□□□□□ -0.03
TMEM47-201ENST00000275954 FBXO47Q5MNV8 452 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 SAPCD2Q86UD0 394 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 IPMKQ8NFU5 416 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ATP6V1E2Q96A05 226 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ZNF536O15090 1300 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ADGRA3Q8IWK6 1321 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 CYB561D2O14569 222 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 FSCN2O14926 492 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 EIF4BP23588 611 aaKnown RBP14.88□□□□□ -0.03
TMEM47-201ENST00000275954 QPCTQ16769 361 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 KATNAL2Q8IYT4 538 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 RASGEF1CQ8N431 466 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 TUBB6Q9BUF5 446 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 RNPEPQ9H4A4 650 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 ABCF3Q9NUQ8 709 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 MYH6P13533 1939 aa14.88□□□□□ -0.03
TMEM47-201ENST00000275954 CASTOR2A6NHX0 329 aa14.87□□□□□ -0.03
TMEM47-201ENST00000275954 RRN3P2A6NIE6 340 aa14.87□□□□□ -0.03
TMEM47-201ENST00000275954 RAG1P15918 1043 aa14.87□□□□□ -0.03
TMEM47-201ENST00000275954 EFHC1Q5JVL4 640 aa14.87□□□□□ -0.03
TMEM47-201ENST00000275954 NLRP9Q7RTR0 991 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms