RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 TRIM43Q96BQ3 446 aaPredicted RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 DDX23Q9BUQ8 820 aaKnown RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 ZCWPW1Q9H0M4 648 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 KLHL11Q9NVR0 708 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 USP18Q9UMW8 372 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 C3orf70A6NLC5 250 aaPredicted RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 HSF2BPO75031 334 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 ERLIN1O75477 346 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 DAB1O75553 588 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 ZMYND10O75800 440 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 FBXO21O94952 628 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 NDUFV1P49821 464 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 TKTL1P51854 596 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 GPS2Q13227 327 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 TAZQ16635 292 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 RAB6CQ53S08 254 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 SPOCD1Q6ZMY3 1216 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 MAATS1Q7Z4T9 603 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 CMASQ8NFW8 434 aaPredicted RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 CENPIQ92674 756 aaPredicted RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 MAGOHBQ96A72 148 aaKnown RBP15.22■□□□□ 0.03
TRIM23-202ENST00000274327 PEBP4Q96S96 227 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 KCNK16Q96T55 309 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 NCAPGQ9BPX3 1015 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 TMEM106CQ9BVX2 250 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 RHOBTB2Q9BYZ6 727 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 RAB6CQ9H0N0 254 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 LRRC19Q9H756 370 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 ZWILCHQ9H900 591 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 ARFGAP3Q9NP61 516 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 PCYOX1Q9UHG3 505 aa15.22■□□□□ 0.03
TRIM23-202ENST00000274327 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 hCG_1818297A0A087WSY0 165 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 ABHD14A-ACY1A0A1B0GW23 586 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 PI4K2BG5E9Z4 385 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 DGKIO75912 1065 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 FGFR3P22607 806 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 BDNFP23560 247 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 CETN2P41208 172 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 CDKN2BP42772 138 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 PTGIRP43119 386 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 FNTAP49354 379 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 CDR1P51861 262 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 RABGGTBP53611 331 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 DAOAP59103 153 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 DHX34Q14147 1143 aaKnown RBP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 SMC1AQ14683 1233 aaKnown RBP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 LLGL1Q15334 1064 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 VARS2Q5ST30 1063 aaKnown RBP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 BEND6Q5SZJ8 279 aaPredicted RBP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 TTC27Q6P3X3 843 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 GPRIN1Q7Z2K8 1008 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 FAM172AQ8WUF8 416 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 NDRG1Q92597 394 aaKnown RBP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 RUNDC3BQ96NL0 473 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 GPR62Q9BZJ7 368 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 PNPLA8Q9NP80 782 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 CNGB3Q9NQW8 809 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.21■□□□□ 0.03
TRIM23-202ENST00000274327 PCSK1NQ9UHG2 260 aa15.21■□□□□ 0.03
TRIM23-202ENST00000274327 FAM187AA6NFU0 413 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ENDOD1O94919 500 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 MYBL2P10244 700 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 KDELR1P24390 212 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 COILP38432 576 aaPredicted RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 BCAR1P56945 870 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ELAVL2Q12926 359 aaKnown RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 SMTNL2Q2TAL5 461 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 FUT10Q6P4F1 479 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 C4orf50Q6ZRC1 276 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 IFT20Q8IY31 132 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 DCP1BQ8IZD4 617 aaKnown RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 SIX6OS1Q8N1H7 587 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 SCML4Q8N228 414 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 SLC2A13Q96QE2 648 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ULBP1Q9BZM6 244 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 CWH43Q9H720 699 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 EPB41L5Q9HCM4 733 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 DMAP1Q9NPF5 467 aaPredicted RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 EFR3BQ9Y2G0 817 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 SF3B1O75533 1304 aaKnown RBP eCLIP15.2■□□□□ 0.022e-7■■■■■ 41.4
TRIM23-202ENST00000274327 LRRD1A4D1F6 860 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ZSCAN5CA6NGD5 496 aaPredicted RBP15.2■□□□□ 0.02
TRIM23-202ENST00000274327 TTI1O43156 1089 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 EFEMP2O95967 443 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 DESP17661 470 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 MATKP42679 507 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ARSEP51690 589 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 HDAC4P56524 1084 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ATP11AP98196 1134 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 CDO1Q16878 200 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 TFDP3Q5H9I0 405 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 KCNT1Q5JUK3 1230 aa15.2■□□□□ 0.02
TRIM23-202ENST00000274327 ZFYVE27Q5T4F4 411 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms