RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 C4BP0C0L5 1744 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 TMEM63AO94886 807 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 CSPG5O95196 566 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
SKP2-202ENST00000274255 PRPSAP1Q14558 356 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 NRF1Q16656 503 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 NBPF12Q5TAG4 269 aaPredicted RBP11.86□□□□□ -0.51
SKP2-202ENST00000274255 TRMT10BQ6PF06 316 aaKnown RBP11.86□□□□□ -0.51
SKP2-202ENST00000274255 CMC1Q7Z7K0 106 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 B3GNT5Q9BYG0 378 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 ATXN3LQ9H3M9 355 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 ZNF358Q9NW07 568 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
SKP2-202ENST00000274255 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
SKP2-202ENST00000274255 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 ATXN1P54253 815 aaKnown RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 LY6KQ17RY6 165 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 C4orf50Q6ZRC1 276 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 PSPC1Q8WXF1 523 aaKnown RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 TFAP2BQ92481 460 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 UTP4Q969X6 686 aaKnown RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 HIC2Q96JB3 615 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 MAGEB5Q9BZ81 275 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 CAAP1Q9H8G2 361 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 ASNSD1Q9NWL6 643 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 SENP1Q9P0U3 644 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 FER1L4A9Z1Z3 1794 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 IGKV6D-41A0A0C4DH26 115 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 WDR27A2RRH5 827 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 TTLL13PA6NNM8 815 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 SORBS2O94875 1100 aaKnown RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 ICAM1P05362 532 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 ERVK-10P10266 1014 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 GSTT1P30711 240 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 MRPS22P82650 360 aaKnown RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 OGDHQ02218 1023 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 OLIG2Q13516 323 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 MORF4L2Q15014 288 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 PLEKHG4Q58EX7 1191 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 FAM156AQ8NDB6 213 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 CENPKQ9BS16 269 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 VCX3AQ9NNX9 186 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 A1CFQ9NQ94 594 aaKnown RBP11.85□□□□□ -0.51
SKP2-202ENST00000274255 PNPOQ9NVS9 261 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
SKP2-202ENST00000274255 LMNAP02545 664 aaKnown RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 TBXAS1P24557 533 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 ETFBP38117 255 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 PLK1P53350 603 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 BLMHQ13867 455 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 DPYSL3Q14195 570 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 PIGHQ14442 188 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 KCTD21Q4G0X4 260 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 FASTKD1Q53R41 847 aaKnown RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 C1orf220Q5T0J3 134 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 N4BP2L1Q5TBK1 243 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 RNF43Q68DV7 783 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 SLFN12LQ6IEE8 588 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 CYP2R1Q6VVX0 501 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 ZNF483Q8TF39 744 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 BORCS6Q96GS4 357 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 NIF3L1Q9GZT8 377 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 HERC5Q9UII4 1024 aaKnown RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 TLK1Q9UKI8 766 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 SLC39A10Q9ULF5 831 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 P4HA2O15460 535 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 SRGAP2BP0DMP2 458 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 TSPAN8P19075 237 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 EEF1B2P24534 225 aaKnown RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 ARL4AP40617 200 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 GTF2BQ00403 316 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 STXBP2Q15833 593 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 DBN1Q16643 649 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 XKR3Q5GH77 459 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 MFSD5Q6N075 450 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 IGDCC3Q8IVU1 814 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 CPT1BQ92523 772 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 ZNF669Q96BR6 464 aaPredicted RBP11.84□□□□□ -0.51
SKP2-202ENST00000274255 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 EBF2Q9HAK2 575 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 STARD13Q9Y3M8 1113 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 HES2Q9Y543 173 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 MYH1P12882 1939 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 MYH4Q9Y623 1939 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 NDC80O14777 642 aa11.84□□□□□ -0.51
SKP2-202ENST00000274255 TSPAN3O60637 253 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms