RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 APOC4-APOC2K7ER74 178 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 TRPA1O75762 1119 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 APOC2P02655 101 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 ZSCAN5DPP0CG00 497 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CAPN2P17655 700 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CDH6P55285 790 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 HDAC4P56524 1084 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 P3H1Q32P28 736 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 BOLA3Q53S33 107 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 AGBL2Q5U5Z8 902 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 KDM7AQ6ZMT4 941 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 PIGZQ86VD9 579 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CCDC25Q86WR0 208 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 RFX6Q8HWS3 928 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 TMEM86AQ8N2M4 240 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CENPIQ92674 756 aaPredicted RBP17.39■□□□□ 0.37
CCDC40-201ENST00000269318 TBCBQ99426 244 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 PAAF1Q9BRP4 392 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 TMEM121Q9BTD3 319 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CALN1Q9BXU9 219 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 ADAM33Q9BZ11 813 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CDC42EP4Q9H3Q1 356 aaKnown RBP17.39■□□□□ 0.37
CCDC40-201ENST00000269318 NGRNQ9NPE2 291 aaKnown RBP17.39■□□□□ 0.37
CCDC40-201ENST00000269318 DDX43Q9NXZ2 648 aaKnown RBP17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CLDN5O00501 218 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 ETS1P14921 441 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 NPR3P17342 541 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 TFE3P19532 575 aaPredicted RBP17.39■□□□□ 0.37
CCDC40-201ENST00000269318 IFFO1Q0D2I5 559 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 MMRN1Q13201 1228 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 KRT71Q3SY84 523 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 ADAM2Q99965 735 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 NCAPGQ9BPX3 1015 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 PCDH9Q9HC56 1237 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CRTAC1Q9NQ79 661 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 NOD1Q9Y239 953 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 SQORQ9Y6N5 450 aa17.39■□□□□ 0.37
CCDC40-201ENST00000269318 CASTOR2A6NHX0 329 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 DNALI1O14645 258 aaPredicted RBP17.38■□□□□ 0.37
CCDC40-201ENST00000269318 CAND2O75155 1236 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 BEST1O76090 585 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 PECAM1P16284 738 aaPredicted RBP17.38■□□□□ 0.37
CCDC40-201ENST00000269318 NR1D1P20393 614 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 IL4RP24394 825 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 LHX1P48742 406 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 PLCB3Q01970 1234 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 ADCY1Q08828 1119 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 PDK2Q15119 407 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 DNAJC21Q5F1R6 531 aaKnown RBP17.38■□□□□ 0.37
CCDC40-201ENST00000269318 KCTD13Q8WZ19 329 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 DDX23Q9BUQ8 820 aaKnown RBP17.38■□□□□ 0.37
CCDC40-201ENST00000269318 TMEM109Q9BVC6 243 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 CENPHQ9H3R5 247 aa17.38■□□□□ 0.37
CCDC40-201ENST00000269318 MOXD2PA6NHM9 499 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 MDM4O15151 490 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 MDH1BQ5I0G3 518 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 SCYL2Q6P3W7 929 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 TRAF7Q6Q0C0 670 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 CLEC20AQ6ZU45 233 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 VSIG1Q86XK7 387 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 RELL1Q8IUW5 271 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 RAET1EQ8TD07 263 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 PWWP2AQ96N64 755 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 SNRNP25Q9BV90 132 aaKnown RBP17.37■□□□□ 0.37
CCDC40-201ENST00000269318 SGK1O00141 431 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 ADIGQ0VDE8 80 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 TIGD5Q53EQ6 642 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 ZC3H12AQ5D1E8 599 aaKnown RBP17.37■□□□□ 0.37
CCDC40-201ENST00000269318 LHX8Q68G74 356 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 CD300LGQ6UXG3 332 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 DSTYKQ6XUX3 929 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 ZNF598Q86UK7 904 aaKnown RBP17.37■□□□□ 0.37
CCDC40-201ENST00000269318 HOOK3Q86VS8 718 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 ZCCHC9Q8N567 271 aaKnown RBP17.37■□□□□ 0.37
CCDC40-201ENST00000269318 RNF169Q8NCN4 708 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 PGBD4Q96DM1 585 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 GLT1D1Q96MS3 346 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 RNF157Q96PX1 679 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 SYT15Q9BQS2 421 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 FOXP3Q9BZS1 431 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 PCDH18Q9HCL0 1135 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 GPATCH2LQ9NWQ4 482 aa17.37■□□□□ 0.37
CCDC40-201ENST00000269318 TIMM13Q9Y5L4 95 aaPredicted RBP17.37■□□□□ 0.37
CCDC40-201ENST00000269318 POMCP01189 267 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 DESP17661 470 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 GDF10P55107 478 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 SLC8A3P57103 927 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 GPS1Q13098 491 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 CA9Q16790 459 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 EFHC1Q5JVL4 640 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 MAP7D3Q8IWC1 876 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 TLCD1Q96CP7 247 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 TSEN34Q9BSV6 310 aaKnown RBP17.36■□□□□ 0.37
CCDC40-201ENST00000269318 CAPS2Q9BXY5 557 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 C10orf88Q9H8K7 445 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 UBN1Q9NPG3 1134 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 TPX2Q9ULW0 747 aaKnown RBP17.36■□□□□ 0.37
CCDC40-201ENST00000269318 BRCA2P51587 3418 aa17.36■□□□□ 0.37
CCDC40-201ENST00000269318 ZNF487B1APH4 448 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms