RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
COPS3-201ENST00000268717 SSR1P43307 286 aaKnown RBP16.1■□□□□ 0.17
COPS3-201ENST00000268717 RGS7P49802 495 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 DRG2P55039 364 aaKnown RBP16.1■□□□□ 0.17
COPS3-201ENST00000268717 DR1Q01658 176 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 ZDHHC14Q8IZN3 488 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 MYCBPAPQ8TBZ2 947 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 CAVIN3Q969G5 261 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 MAGOHBQ96A72 148 aaKnown RBP16.1■□□□□ 0.17
COPS3-201ENST00000268717 SLITRK1Q96PX8 696 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 PRDM12Q9H4Q4 367 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 VIPAS39Q9H9C1 493 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 CRTAC1Q9NQ79 661 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 UTP11Q9Y3A2 253 aaKnown RBP16.1■□□□□ 0.17
COPS3-201ENST00000268717 PRUNE2Q8WUY3 3088 aa16.1■□□□□ 0.17
COPS3-201ENST00000268717 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 ENPP3O14638 875 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 ZMYND10O75800 440 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 KRT1P04264 644 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 FAM200BP0CF97 657 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 MYBL2P10244 700 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 PDGFRAP16234 1089 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 GBP1P32455 592 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 COILP38432 576 aaPredicted RBP16.09■□□□□ 0.17
COPS3-201ENST00000268717 PTPN9P43378 593 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 HTRA4P83105 476 aaPredicted RBP16.09■□□□□ 0.17
COPS3-201ENST00000268717 MAPRE1Q15691 268 aaKnown RBP16.09■□□□□ 0.17
COPS3-201ENST00000268717 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 DAB2IPQ5VWQ8 1189 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 PAQR9Q6ZVX9 377 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 SYDE1Q6ZW31 735 aaPredicted RBP16.09■□□□□ 0.17
COPS3-201ENST00000268717 CCDC50Q8IVM0 306 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 ARFGAP1Q8N6T3 406 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 EMC1Q8N766 993 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 RXFP2Q8WXD0 754 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 FAM114A2Q9NRY5 505 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 FEZ2Q9UHY8 353 aaPredicted RBP16.09■□□□□ 0.17
COPS3-201ENST00000268717 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 INSL6Q9Y581 213 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 NLRC5Q86WI3 1866 aa16.09■□□□□ 0.17
COPS3-201ENST00000268717 TTI1O43156 1089 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.17
COPS3-201ENST00000268717 GABBR2O75899 941 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 RALAP11233 206 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 FOSL2P15408 326 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 FLT3P36888 993 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.17
COPS3-201ENST00000268717 TAZQ16635 292 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 ODF2Q5BJF6 829 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 EFHC1Q5JVL4 640 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 FAM171BQ6P995 826 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 CCDC137Q6PK04 289 aaKnown RBP16.08■□□□□ 0.17
COPS3-201ENST00000268717 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 VSIG1Q86XK7 387 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.173e-8■■■■■ 29
COPS3-201ENST00000268717 TBCBQ99426 244 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 FAM129AQ9BZQ8 928 aa16.08■□□□□ 0.17
COPS3-201ENST00000268717 COL4A6Q14031 1691 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 TCRBV7S2A1N4TA0A589 114 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 ATP2C2O75185 946 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 FBXO21O94952 628 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 UPP2O95045 317 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 TJP3O95049 919 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 TCF4P15884 667 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 MIPP30301 263 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 SDC4P31431 198 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 PTGIRP43119 386 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 CCNG2Q16589 344 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 TFDP3Q5H9I0 405 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 INTS6LQ5JSJ4 861 aaKnown RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 DUPD1Q68J44 220 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 DRICH1Q6PGQ1 229 aaPredicted RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 SPOCD1Q6ZMY3 1216 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 ADAT2Q7Z6V5 191 aaKnown RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 FAM35AQ86V20 835 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 PIGZQ86VD9 579 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 JAMLQ86YT9 394 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 THEM5Q8N1Q8 247 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 GRK7Q8WTQ7 553 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 TEKT4Q8WW24 435 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 CASKIN2Q8WXE0 1202 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 PIWIL1Q96J94 861 aaKnown RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 RTP3Q9BQQ7 232 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 ERP44Q9BS26 406 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 C11orf84Q9BUA3 381 aaPredicted RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 B3GNT5Q9BYG0 378 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 FRMD8P1Q9BZ68 369 aaPredicted RBP16.08■□□□□ 0.16
COPS3-201ENST00000268717 TBC1D13Q9NVG8 400 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 OGFRQ9NZT2 677 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 USP18Q9UMW8 372 aa16.08■□□□□ 0.16
COPS3-201ENST00000268717 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
COPS3-201ENST00000268717 hCG_1818297A0A087WSY0 165 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 LINC01553A4QN01 128 aa16.07■□□□□ 0.16
COPS3-201ENST00000268717 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms