RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 HSF2BPO75031 334 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 COILP38432 576 aaPredicted RBP17.14■□□□□ 0.33
TPM1-201ENST00000267996 IKBKEQ14164 716 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 MRPL58Q14197 206 aaKnown RBP17.14■□□□□ 0.33
TPM1-201ENST00000267996 SMC1AQ14683 1233 aaKnown RBP17.14■□□□□ 0.33
TPM1-201ENST00000267996 MAP9Q49MG5 647 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.14■□□□□ 0.33
TPM1-201ENST00000267996 PEBP4Q96S96 227 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 KCNK16Q96T55 309 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 HINFPQ9BQA5 517 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 ZWILCHQ9H900 591 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 CNGB3Q9NQW8 809 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 HOMER3Q9NSC5 361 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 hCG_1818297A0A087WSY0 165 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 ZSCAN5CA6NGD5 496 aaPredicted RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 TBKBP1A7MCY6 615 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 KIAA0355O15063 1070 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 ENDOD1O94919 500 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 GALTP07902 379 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 NDUFV1P49821 464 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 TKTL1P51854 596 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 DR1Q01658 176 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 LLGL1Q15334 1064 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 RAB6CQ53S08 254 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 TFDP3Q5H9I0 405 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 AENQ8WTP8 325 aaKnown RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 CASKIN2Q8WXE0 1202 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 SLCO2A1Q92959 643 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 DCLK3Q9C098 648 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 ZCWPW1Q9H0M4 648 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 RAB6CQ9H0N0 254 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 PNPLA8Q9NP80 782 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.13■□□□□ 0.33
TPM1-201ENST00000267996 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 FAN1Q9Y2M0 1017 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 LTBP2Q14767 1821 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 LRRD1A4D1F6 860 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 DAB1O75553 588 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 TIMP1P01033 207 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 FGFR3P22607 806 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 BDNFP23560 247 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 KDELR1P24390 212 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 MATKP42679 507 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 CARSP49589 748 aaKnown RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 ARSEP51690 589 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 HDAC4P56524 1084 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 DAOAP59103 153 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 BOLA3Q53S33 107 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 CCDC137Q6PK04 289 aaKnown RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 GPRIN1Q7Z2K8 1008 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 BNIPLQ7Z465 357 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 NECAB2Q7Z6G3 386 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 SIX6OS1Q8N1H7 587 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 SCML4Q8N228 414 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 LRRC43Q8N309 656 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 FAM172AQ8WUF8 416 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 TEKT4Q8WW24 435 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 NT5C3BQ969T7 300 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 SLC2A13Q96QE2 648 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 ULBP1Q9BZM6 244 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
TPM1-201ENST00000267996 HCSTQ9UBK5 93 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
TPM1-201ENST00000267996 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 TRIM43BA6NCK2 446 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 DGKIO75912 1065 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 TJP3O95049 919 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 DESP17661 470 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 YWHAZP63104 245 aaKnown RBP17.12■□□□□ 0.33
TPM1-201ENST00000267996 ATP11AP98196 1134 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 ADCY2Q08462 1091 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 CCNG2Q16589 344 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 SMTNL2Q2TAL5 461 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 KCNT1Q5JUK3 1230 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 ZFYVE27Q5T4F4 411 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 C4orf50Q6ZRC1 276 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 STRADAQ7RTN6 431 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 JAMLQ86YT9 394 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
TPM1-201ENST00000267996 TRIM43Q96BQ3 446 aaPredicted RBP17.12■□□□□ 0.33
TPM1-201ENST00000267996 TBCBQ99426 244 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 FUT8Q9BYC5 575 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 RHOBTB2Q9BYZ6 727 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 ADAM33Q9BZ11 813 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 NGRNQ9NPE2 291 aaKnown RBP17.12■□□□□ 0.33
TPM1-201ENST00000267996 CHST7Q9NS84 486 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 R3HDM2Q9Y2K5 976 aaKnown RBP17.12■□□□□ 0.33
TPM1-201ENST00000267996 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
TPM1-201ENST00000267996 ESYT3A0FGR9 886 aa17.11■□□□□ 0.33
TPM1-201ENST00000267996 EFEMP2O95967 443 aa17.11■□□□□ 0.33
TPM1-201ENST00000267996 KRT10P13645 584 aa17.11■□□□□ 0.33
TPM1-201ENST00000267996 TFE3P19532 575 aaPredicted RBP17.11■□□□□ 0.33
TPM1-201ENST00000267996 ITGB8P26012 769 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms