RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 GOLGA7BQ2TAP0 167 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 BOLA3Q53S33 107 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 FAM102AQ5T9C2 384 aaPredicted RBP11.66□□□□□ -0.54
MSH3-201ENST00000265081 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 SLC26A9Q7LBE3 791 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 TRPM8Q7Z2W7 1104 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 HEXIM2Q96MH2 286 aaKnown RBP11.66□□□□□ -0.54
MSH3-201ENST00000265081 DNAJC17Q9NVM6 304 aaKnown RBP11.66□□□□□ -0.54
MSH3-201ENST00000265081 MTMR10Q9NXD2 777 aa11.66□□□□□ -0.54
MSH3-201ENST00000265081 SAE1Q9UBE0 346 aaPredicted RBP11.66□□□□□ -0.54
MSH3-201ENST00000265081 EXOC1LA0A1B0GW35 172 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 CFAP69A5D8W1 941 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 FOXO6A8MYZ6 492 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 PAPSS1O43252 624 aaPredicted RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 MGRN1O60291 552 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 DHRS4L1P0CG22 281 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 SKIV2L2P42285 1042 aaKnown RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 VPS41P49754 854 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 IGBP1P78318 339 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 MGAT5Q09328 741 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 PDK4Q16654 411 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 ATP11CQ8NB49 1132 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 KCTD6Q8NC69 237 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 PTPN18Q99952 460 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 ADAM33Q9BZ11 813 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 PCDH18Q9HCL0 1135 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 CAPN7Q9Y6W3 813 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 PPEF2O14830 753 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 CSDE1O75534 798 aaKnown RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 ZNF865P0CJ78 1059 aaPredicted RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 CCNB1P14635 433 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 HDAC4P56524 1084 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 BNIP1Q12981 228 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 ASRGL1Q7L266 308 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 EIF2AQ9BY44 585 aaKnown RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.548e-6■■■■■ 107
MSH3-201ENST00000265081 TCP11X1B4DZS4 312 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 RNF8O76064 485 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 SMIM10L2AP0DMW4 78 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 SMIM10L2BP0DMW5 78 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 SSR1P43307 286 aaKnown RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 EIF3EP60228 445 aaKnown RBP11.65□□□□□ -0.54
MSH3-201ENST00000265081 TFDP2Q14188 446 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 C7orf31Q8N865 590 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 MCUQ8NE86 351 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 MKS1Q9NXB0 559 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 SAMD15Q9P1V8 674 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 TUBGCP4Q9UGJ1 667 aa11.65□□□□□ -0.54
MSH3-201ENST00000265081 SCN10AQ9Y5Y9 1956 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 SPAG6O75602 509 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 GSTA2P09210 222 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 NKX3-2P78367 333 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 RNASELQ05823 741 aaKnown RBP11.65□□□□□ -0.55
MSH3-201ENST00000265081 PDIA2Q13087 525 aaKnown RBP11.65□□□□□ -0.55
MSH3-201ENST00000265081 KLHL38Q2WGJ6 581 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 NOTUMQ6P988 496 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 PSTKQ8IV42 348 aaKnown RBP11.65□□□□□ -0.55
MSH3-201ENST00000265081 ZBED8Q8IZ13 594 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 OR6J1Q8NGC5 347 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 UBA3Q8TBC4 463 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 OLFM3Q96PB7 478 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 CDHR5Q9HBB8 845 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 HESX1Q9UBX0 185 aa11.65□□□□□ -0.55
MSH3-201ENST00000265081 IQCA1LA6NCM1 817 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 RASA4BC9J798 803 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 RASA4O43374 803 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 ALADP13716 330 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 ROR1Q01973 937 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 PKN2Q16513 984 aaKnown RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 CYS1Q717R9 158 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 BANPQ8N9N5 519 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 PCDH19Q8TAB3 1148 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 GCOM2Q9BZD3 368 aaPredicted RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.64□□□□□ -0.55
MSH3-201ENST00000265081 CCL15-CCL14A0A0B4J2E2 113 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 WARSP23381 471 aaKnown RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 LRPAP1P30533 357 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 L1CAMP32004 1257 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 PSMC4P43686 418 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 CCL15Q16663 113 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 OTUD1Q5VV17 481 aaPredicted RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 FUKQ8N0W3 1084 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 GBP7Q8N8V2 638 aaPredicted RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 C12orf29Q8N999 325 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 ANKRD52Q8NB46 1076 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 MAK16Q9BXY0 300 aaKnown RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 RCOR3Q9P2K3 495 aaPredicted RBP11.64□□□□□ -0.55
MSH3-201ENST00000265081 ZNF180Q9UJW8 692 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 ARL2BPQ9Y2Y0 163 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 GOLGA6L7A0A1B0GV03 622 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 MCF2LO15068 1137 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 GCATO75600 419 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 ZWINTO95229 277 aa11.64□□□□□ -0.55
MSH3-201ENST00000265081 PHBP35232 272 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms