RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NDEL1Q9GZM8 345 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 DPP3Q9NY33 737 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 STX7O15400 261 aaKnown RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 H2AFYO75367 372 aaKnown RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 RPA1P27694 616 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 IER5Q5VY09 327 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 DNAAF5Q86Y56 855 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 TDRD5Q8NAT2 981 aaKnown RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 EFCAB1Q9HAE3 211 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 KCNH7Q9NS40 1196 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 SLC38A7Q9NVC3 462 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 DDIT4Q9NX09 232 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 TECPR2O15040 1411 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 GRK2P25098 689 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 HERVK_113P62684 666 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 RASA2Q15283 850 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 VN1R5Q7Z5H4 357 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 RAET1EQ8TD07 263 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 PAFAH2Q99487 392 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 DMAP1Q9NPF5 467 aaPredicted RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 KIF20BQ96Q89 1820 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 MEI4A8MW99 385 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 C2CD2LO14523 706 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 SLC26A4O43511 780 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 CHRNB3Q05901 458 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 UGT3A1Q6NUS8 523 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 DCP1BQ8IZD4 617 aaKnown RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 ZNF512BQ96KM6 892 aaPredicted RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 CDC42EP4Q9H3Q1 356 aaKnown RBP18.59■□□□□ 0.57
COL5A3-201ENST00000264828 TAGLN3Q9UI15 199 aa18.59■□□□□ 0.57
COL5A3-201ENST00000264828 ATP9AO75110 1047 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 ANGEL2Q5VTE6 544 aaKnown RBP18.58■□□□□ 0.57
COL5A3-201ENST00000264828 STYK1Q6J9G0 422 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 APOL2Q9BQE5 337 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 TMEM121Q9BTD3 319 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 ROGDIQ9GZN7 287 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 GEMIN8Q9NWZ8 242 aaKnown RBP18.58■□□□□ 0.57
COL5A3-201ENST00000264828 P4HA2O15460 535 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 GPRC5DQ9NZD1 345 aa18.58■□□□□ 0.57
COL5A3-201ENST00000264828 PRG3Q9Y2Y8 225 aaPredicted RBP18.58■□□□□ 0.57
COL5A3-201ENST00000264828 PCSK1P29120 753 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 SEL1L3Q68CR1 1132 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 MKNK1Q9BUB5 465 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 KATNAL1Q9BW62 490 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 CDC42EP1Q00587 391 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 TRAF2Q12933 501 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 ERAP2Q6P179 960 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 ANKRD49Q8WVL7 239 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 MRPS26Q9BYN8 205 aaKnown RBP18.58■□□□□ 0.56
COL5A3-201ENST00000264828 IL1RAPL1Q9NZN1 696 aa18.58■□□□□ 0.56
COL5A3-201ENST00000264828 SAC3D1A6NKF1 404 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 GOLGA8TH3BQL2 631 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 GEMP55040 296 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 CNTN1Q12860 1018 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 GPRC5CQ9NQ84 441 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 PSMD7P51665 324 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 TKFCQ3LXA3 575 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 MFSD4BQ5TF39 518 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 ATP8B4Q8TF62 1192 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 MTMR12Q9C0I1 747 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 INTS13Q9NVM9 706 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 NYAP2Q9P242 653 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 GTF3C4Q9UKN8 822 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 PRR23AA6NEV1 266 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 ATP6V1G2O95670 118 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 RRM2P31350 389 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 TRIM71Q2Q1W2 868 aaKnown RBP18.57■□□□□ 0.56
COL5A3-201ENST00000264828 HHIPL2Q6UWX4 724 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 STRA8Q7Z7C7 330 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 LRRC6Q86X45 466 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 KRT78Q8N1N4 520 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 UBE2Q2LH0YL09 131 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 MTSS1O43312 755 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 UBOX5O94941 541 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 CALB2P22676 271 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 BMPR2Q13873 1038 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 TAAR1Q96RJ0 339 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 DNAJC7Q99615 494 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 TRIM8Q9BZR9 551 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 RMND5AQ9H871 391 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 SESN1Q9Y6P5 492 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 CNTNAP4Q9C0A0 1308 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 C2orf81A6NN90 581 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 UBXN8O00124 270 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 CYP2C9P11712 490 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 NUP107P57740 925 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 ZNF614Q8N883 585 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 WHRNQ9P202 907 aa18.57■□□□□ 0.56
COL5A3-201ENST00000264828 PDZK1P1A8MUH7 402 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 MAGEB2O15479 319 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 ENDOD1O94919 500 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 RPL10AP62906 217 aaKnown RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 GRB10Q13322 594 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 TFDP3Q5H9I0 405 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 POP1Q99575 1024 aaKnown RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 HPS5Q9UPZ3 1129 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 CDH18Q13634 790 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 ARMC6Q6NXE6 501 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms