RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 DHTKD1Q96HY7 919 aaPredicted RBP17.03■□□□□ 0.32
USE1-201ENST00000263897 FBRSL1Q9HCM7 1045 aaKnown RBP17.03■□□□□ 0.32
USE1-201ENST00000263897 MAN1B1Q9UKM7 699 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 CPQQ9Y646 472 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 HELZP42694 1942 aaKnown RBP17.03■□□□□ 0.32
USE1-201ENST00000263897 VPS13AQ96RL7 3174 aa17.03■□□□□ 0.32
USE1-201ENST00000263897 TRIM49BA6NDI0 452 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 PAPSS2O95340 614 aaPredicted RBP17.02■□□□□ 0.32
USE1-201ENST00000263897 ZDHHC11BP0C7U3 371 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 CD58P19256 250 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 ADORA2BP29275 332 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 MAP3K7CLP57077 242 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 STIM1Q13586 685 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 TCERG1LQ5VWI1 586 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 ADGRG2Q8IZP9 1017 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 TATDN2Q93075 761 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 P2RY13Q9BPV8 354 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.32
USE1-201ENST00000263897 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 PSMA7O14818 248 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 FAM200BP0CF97 657 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
USE1-201ENST00000263897 CD44P16070 742 aaKnown RBP17.01■□□□□ 0.31
USE1-201ENST00000263897 PPP1R2P41236 205 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 HECTD3Q5T447 861 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 CLEC20AQ6ZU45 233 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 TTC39CQ8N584 583 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 FBXO44Q9H4M3 255 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 C2orf42Q9NWW7 574 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 SMPD4Q9NXE4 827 aa17.01■□□□□ 0.31
USE1-201ENST00000263897 ARMCX3Q9UH62 379 aaPredicted RBP17.01■□□□□ 0.31
USE1-201ENST00000263897 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
USE1-201ENST00000263897 HHLA1C9JL84 531 aa17■□□□□ 0.31
USE1-201ENST00000263897 K7ESF4 209 aa17■□□□□ 0.31
USE1-201ENST00000263897 SLC9A3R1O14745 358 aaPredicted RBP17■□□□□ 0.31
USE1-201ENST00000263897 COCHO43405 550 aa17■□□□□ 0.31
USE1-201ENST00000263897 NFATC1O95644 943 aa17■□□□□ 0.31
USE1-201ENST00000263897 EGFP01133 1207 aa17■□□□□ 0.31
USE1-201ENST00000263897 DRD1P21728 446 aa17■□□□□ 0.31
USE1-201ENST00000263897 BMP6P22004 513 aa17■□□□□ 0.31
USE1-201ENST00000263897 TUBP50607 506 aa17■□□□□ 0.31
USE1-201ENST00000263897 CBWD6Q4V339 395 aa17■□□□□ 0.31
USE1-201ENST00000263897 DCAF17Q5H9S7 520 aaPredicted RBP17■□□□□ 0.31
USE1-201ENST00000263897 CBWD3Q5JTY5 395 aa17■□□□□ 0.31
USE1-201ENST00000263897 CBWD5Q5RIA9 395 aa17■□□□□ 0.31
USE1-201ENST00000263897 NAIF1Q69YI7 327 aaPredicted RBP17■□□□□ 0.31
USE1-201ENST00000263897 FILIP1Q7Z7B0 1213 aa17■□□□□ 0.31
USE1-201ENST00000263897 DDX42Q86XP3 938 aaKnown RBP eCLIP17■□□□□ 0.31
USE1-201ENST00000263897 RUBCNQ92622 972 aa17■□□□□ 0.31
USE1-201ENST00000263897 CD101Q93033 1021 aa17■□□□□ 0.31
USE1-201ENST00000263897 SLC35C1Q96A29 364 aa17■□□□□ 0.31
USE1-201ENST00000263897 HEXIM2Q96MH2 286 aaKnown RBP17■□□□□ 0.31
USE1-201ENST00000263897 FAM124BQ9H5Z6 455 aaPredicted RBP17■□□□□ 0.31
USE1-201ENST00000263897 CCSER2Q9H7U1 834 aa17■□□□□ 0.31
USE1-201ENST00000263897 METTL14Q9HCE5 456 aaKnown RBP17■□□□□ 0.31
USE1-201ENST00000263897 CISHQ9NSE2 258 aa17■□□□□ 0.31
USE1-201ENST00000263897 GMIPQ9P107 970 aa17■□□□□ 0.31
USE1-201ENST00000263897 CFAP97Q9P2B7 532 aa17■□□□□ 0.31
USE1-201ENST00000263897 ATG13O75143 517 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 HOXA6P31267 233 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 PGFP49763 221 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 MORC3Q14149 939 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 ZNF394Q53GI3 561 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 PPP1R26Q5T8A7 1209 aaPredicted RBP16.99■□□□□ 0.31
USE1-201ENST00000263897 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 ZFRQ96KR1 1074 aaKnown RBP16.99■□□□□ 0.31
USE1-201ENST00000263897 CEP63Q96MT8 703 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 DUSP9Q99956 384 aaKnown RBP16.99■□□□□ 0.31
USE1-201ENST00000263897 DUSP16Q9BY84 665 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 EPC1Q9H2F5 836 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 PNPLA8Q9NP80 782 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 TLR8Q9NR97 1041 aaKnown RBP16.99■□□□□ 0.31
USE1-201ENST00000263897 SCML2Q9UQR0 700 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 MYOFQ9NZM1 2061 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 DMDP11532 3685 aa16.99■□□□□ 0.31
USE1-201ENST00000263897 E2F8A0AVK6 867 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 CHURC1-FNTBB4DL54 471 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 ACO1P21399 889 aaKnown RBP16.98■□□□□ 0.31
USE1-201ENST00000263897 RAD23BP54727 409 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 DMWDQ09019 674 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 FBXO43Q4G163 708 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 KLHL10Q6JEL2 608 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 TTI2Q6NXR4 508 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 FOXR2Q6PJQ5 311 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 GPRIN1Q7Z2K8 1008 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 SLC4A11Q8NBS3 891 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 JAKMIP2Q96AA8 810 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 TMEM176AQ96HP8 235 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 ARID3AQ99856 593 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 TBC1D14Q9P2M4 693 aa16.98■□□□□ 0.31
USE1-201ENST00000263897 BIN1O00499 593 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 CYP17A1P05093 508 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 OPRD1P41143 372 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 FNTBP49356 437 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 KIF11P52732 1056 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 DHCR24Q15392 516 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 GAB4Q2WGN9 574 aa16.97■□□□□ 0.31
USE1-201ENST00000263897 RHBDF2Q6PJF5 856 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms