RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 PRKCEQ02156 737 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TRAF2Q12933 501 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TRIM28Q13263 835 aaKnown RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TRIM65Q6PJ69 517 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 IZUMO1Q8IYV9 350 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 MAGEB10Q96LZ2 347 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 POLR1BQ9H9Y6 1135 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 EIF3LQ9Y262 564 aaKnown RBP13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TMEM88BA6NKF7 163 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TRPC5OSA6NMA1 111 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 FOXN1O15353 648 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 VTNP04004 478 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 IL5RAQ01344 420 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 AMHR2Q16671 573 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 ARMCX6Q7L4S7 300 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 MCRS1Q96EZ8 462 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 QRICH2Q9H0J4 1663 aa13.29□□□□□ -0.28
TTC39A-202ENST00000262676 TAF4O00268 1085 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 POLBP06746 335 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 NQO1P15559 274 aaKnown RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ATP6V1C1P21283 382 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 SP3Q02447 781 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 SFSWAPQ12872 951 aaKnown RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CCNIQ14094 377 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 TAF5Q15542 800 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 SYTL1Q8IYJ3 562 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 KLHL4Q9C0H6 718 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ZNF624Q9P2J8 865 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 TEX28O15482 410 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 LPCAT2Q7L5N7 544 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 COMMD2Q86X83 199 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 C18orf8Q96DM3 657 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 HEY2Q9UBP5 337 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ADAMTS13Q76LX8 1427 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CENPXA8MT69 81 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CLPTM1O96005 669 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 SERPINH1P50454 418 aaKnown RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 PTGISQ16647 500 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 HIST2H2ACQ16777 129 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 SMTNL2Q2TAL5 461 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 HIST2H2AA3Q6FI13 130 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ENOSF1Q7L5Y1 443 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ARID3BQ8IVW6 561 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 PAIP1Q9H074 479 aaKnown RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 BIRC5O15392 142 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 NFICP08651 508 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CHRNB3Q05901 458 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 MTFR1Q15390 333 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 DUOXA2Q1HG44 320 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ATAD3BQ5T9A4 648 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 MACC1Q6ZN28 852 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 FBXO33Q7Z6M2 555 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 LRRC49Q8IUZ0 686 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 KCNB2Q92953 911 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ZNF560Q96MR9 790 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CHP1Q99653 195 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 TMEM79Q9BSE2 394 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 PVALEFA0A1B0GWK0 134 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 VWA5AO00534 786 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 KRT6BP04259 564 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 PDGFRAP16234 1089 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 KRT6CP48668 564 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 PRAMEF19Q5SWL8 479 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 C3orf67Q6ZVT6 689 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 CACTIN-AS1Q8N1I8 211 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 SRBD1Q8N5C6 995 aaKnown RBP13.28□□□□□ -0.28
TTC39A-202ENST00000262676 GPR63Q9BZJ6 419 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
TTC39A-202ENST00000262676 ARHGEF40Q8TER5 1519 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 HEATR9A2RTY3 570 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 DDR1Q08345 913 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 LRRC34Q8IZ02 419 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-202ENST00000262676 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.28
TTC39A-202ENST00000262676 ENKURQ8TC29 256 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 MAGED4Q96JG8 741 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 FHOD1Q9Y613 1164 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 TBKBP1A7MCY6 615 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 ATP9AO75110 1047 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 WDR72Q3MJ13 1102 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 CACHD1Q5VU97 1274 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 RGMBQ6NW40 437 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 SCUBE1Q8IWY4 988 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 HPS3Q969F9 1004 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 FAM111AQ96PZ2 611 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 DDX18Q9NVP1 670 aaKnown RBP13.27□□□□□ -0.28
TTC39A-202ENST00000262676 MSRAQ9UJ68 235 aa13.27□□□□□ -0.28
TTC39A-202ENST00000262676 SMIM31A0A1B0GVY4 71 aa13.27□□□□□ -0.29
TTC39A-202ENST00000262676 NR5A2O00482 541 aa13.27□□□□□ -0.29
TTC39A-202ENST00000262676 SNUPNO95149 360 aaKnown RBP13.27□□□□□ -0.29
TTC39A-202ENST00000262676 HERVK_113P62684 666 aa13.27□□□□□ -0.29
TTC39A-202ENST00000262676 BEX3Q00994 111 aa13.27□□□□□ -0.29
TTC39A-202ENST00000262676 TAF8Q7Z7C8 310 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms