RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 BTBD8Q5XKL5 378 aa10.54□□□□□ -0.72
PKD1-201ENST00000262304 TMEM120AQ9BXJ8 343 aa10.54□□□□□ -0.72
PKD1-201ENST00000262304 TRMT13Q9NUP7 481 aaKnown RBP10.54□□□□□ -0.72
PKD1-201ENST00000262304 ETS2P15036 469 aa10.54□□□□□ -0.72
PKD1-201ENST00000262304 CRYMQ14894 314 aa10.54□□□□□ -0.72
PKD1-201ENST00000262304 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
PKD1-201ENST00000262304 IARS2Q9NSE4 1012 aaKnown RBP10.54□□□□□ -0.72
PKD1-201ENST00000262304 AFDNP55196 1824 aaKnown RBP10.54□□□□□ -0.72
PKD1-201ENST00000262304 HIST1H2AGP0C0S8 130 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 HIST1H2ADP20671 130 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 HIST1H2AHQ96KK5 128 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 HIST1H2AJQ99878 128 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 H2AFJQ9BTM1 129 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 KPNA4O00629 521 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 TGM2P21980 687 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PHKA2P46019 1235 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 STX4Q12846 297 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 ATL2Q8NHH9 583 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 ZNF671Q8TAW3 534 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 MMRN1Q13201 1228 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 KRR1Q13601 381 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 Q4G0T1 1027 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PRR23CQ6ZRP0 262 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 SHROOM3Q8TF72 1996 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 CHRM3P20309 590 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 CLEC16AQ2KHT3 1053 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 TNIP2Q8NFZ5 429 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 E2F7Q96AV8 911 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 MED8Q96G25 268 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PARVAQ9NVD7 372 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 SIK3Q9Y2K2 1263 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 KATNA1O75449 491 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 TRMT2AQ8IZ69 625 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 PLEKHG4BQ96PX9 1271 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 GPR63Q9BZJ6 419 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 USP17L10C9JJH3 530 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 STAU1O95793 577 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 SDE2Q6IQ49 451 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 MACC1Q6ZN28 852 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 RMDN3Q96TC7 470 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 C3orf70A6NLC5 250 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 RASA2Q15283 850 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 RNF44Q7L0R7 432 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 SLC44A5Q8NCS7 719 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 AGPAT5Q9NUQ2 364 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 ZHX2Q9Y6X8 837 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PRPF3O43395 683 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 SASH1O94885 1247 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 SWSAP1Q6NVH7 229 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 SLC9A7Q96T83 725 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 INPP4BO15327 924 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PLOD3O60568 738 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 NOS3P29474 1203 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 AQP5P55064 265 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 MYLK2Q9H1R3 596 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 RWDD3Q9Y3V2 267 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 KNOP1Q1ED39 458 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 RCOR2Q8IZ40 523 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 CLK2P49760 499 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 DHX34Q14147 1143 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 DDR2Q16832 855 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 GJB7Q6PEY0 223 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 TMED8Q6PL24 325 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 TDRD5Q8NAT2 981 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 ERAP1Q9NZ08 941 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 FAM86B2P0C5J1 330 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 RALAP11233 206 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 HSD17B3P37058 310 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 RAD51Q06609 339 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 OCLNQ16625 522 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 AMHR2Q16671 573 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 TXNRD1Q16881 649 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 PTPN20Q4JDL3 420 aa10.53□□□□□ -0.72
PKD1-201ENST00000262304 CCNI2Q6ZMN8 369 aaPredicted RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 RUVBL2Q9Y230 463 aaKnown RBP10.53□□□□□ -0.72
PKD1-201ENST00000262304 UBA3Q8TBC4 463 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 KCTD10Q9H3F6 313 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 RBAKQ9NYW8 714 aaPredicted RBP10.52□□□□□ -0.72
PKD1-201ENST00000262304 R3HDM2Q9Y2K5 976 aaKnown RBP10.52□□□□□ -0.72
PKD1-201ENST00000262304 PLEKHG2Q9H7P9 1386 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 GSTA3Q16772 222 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 UVRAGQ9P2Y5 699 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 LYVE1Q9Y5Y7 322 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 CRB1P82279 1406 aa10.52□□□□□ -0.72
PKD1-201ENST00000262304 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.73
PKD1-201ENST00000262304 ARMC7Q9H6L4 198 aa10.52□□□□□ -0.73
PKD1-201ENST00000262304 SMG5Q9UPR3 1016 aaKnown RBP10.52□□□□□ -0.73
PKD1-201ENST00000262304 CLTCQ00610 1675 aaKnown RBP10.52□□□□□ -0.73
PKD1-201ENST00000262304 TULP4Q9NRJ4 1543 aa10.52□□□□□ -0.73
PKD1-201ENST00000262304 RPN2P04844 631 aa10.52□□□□□ -0.73
PKD1-201ENST00000262304 ZNF669Q96BR6 464 aaPredicted RBP10.52□□□□□ -0.73
PKD1-201ENST00000262304 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
PKD1-201ENST00000262304 ADAM30Q9UKF2 790 aa10.52□□□□□ -0.73
PKD1-201ENST00000262304 ATXN2Q99700 1313 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms