RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 WNT6Q9Y6F9 365 aa24.27■■□□□ 1.48
LSM4-201ENST00000252816 MYH10P35580 1976 aa24.27■■□□□ 1.48
LSM4-201ENST00000252816 LEFTY2O00292 366 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 CHRNB1P11230 501 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 MAGEA9P43362 315 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 PDGFRLQ15198 375 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 DPCR1Q3MIW9 517 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 IRF2BP1Q8IU81 584 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 KAT5Q92993 513 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 NT5C1BQ96P26 610 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 FBXO44Q9H4M3 255 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 LMAN1LQ9HAT1 526 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 SPATA6Q9NWH7 488 aaPredicted RBP24.26■■□□□ 1.47
LSM4-201ENST00000252816 DUS2Q9NX74 493 aaKnown RBP24.26■■□□□ 1.47
LSM4-201ENST00000252816 MYO15AQ9UKN7 3530 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 PATJQ8NI35 1801 aa24.26■■□□□ 1.47
LSM4-201ENST00000252816 COCHO43405 550 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 AFPP02771 609 aaKnown RBP24.25■■□□□ 1.47
LSM4-201ENST00000252816 CCDC192P0DO97 292 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 TBXAS1P24557 533 aaPredicted RBP24.25■■□□□ 1.47
LSM4-201ENST00000252816 HOXD11P31277 338 aaPredicted RBP24.25■■□□□ 1.47
LSM4-201ENST00000252816 HECTD3Q5T447 861 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 ARHGAP17Q68EM7 881 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 C1orf228Q6PIY5 440 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 GPT2Q8TD30 523 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 CNOT6LQ96LI5 555 aaKnown RBP24.25■■□□□ 1.47
LSM4-201ENST00000252816 GBP4Q96PP9 640 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 LINC00597Q9H2U6 94 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 CCSER2Q9H7U1 834 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 PNPLA8Q9NP80 782 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 SCML2Q9UQR0 700 aa24.25■■□□□ 1.47
LSM4-201ENST00000252816 HELZP42694 1942 aaKnown RBP24.25■■□□□ 1.47
LSM4-201ENST00000252816 CYP26A1O43174 497 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 ACO1P21399 889 aaKnown RBP24.24■■□□□ 1.47
LSM4-201ENST00000252816 YWHAEP62258 255 aaKnown RBP24.24■■□□□ 1.47
LSM4-201ENST00000252816 CETN1Q12798 172 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 PON2Q15165 354 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 EML3Q32P44 896 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 PPM1KQ8N3J5 372 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 EHBP1Q8NDI1 1231 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 CHRDQ9H2X0 955 aa24.24■■□□□ 1.47
LSM4-201ENST00000252816 MBL2P11226 248 aaPredicted RBP24.23■■□□□ 1.47
LSM4-201ENST00000252816 IFNAR2P48551 515 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 TUBP50607 506 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 KIF11P52732 1056 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 MTAPQ13126 283 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 ALYREFQ86V81 257 aaKnown RBP24.23■■□□□ 1.47
LSM4-201ENST00000252816 TTC30AQ86WT1 665 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 ARHGEF19Q8IW93 802 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 ZFRQ96KR1 1074 aaKnown RBP24.23■■□□□ 1.47
LSM4-201ENST00000252816 ECT2Q9H8V3 914 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 RBM12Q9NTZ6 932 aaKnown RBP24.23■■□□□ 1.47
LSM4-201ENST00000252816 OSER1Q9NX31 292 aa24.23■■□□□ 1.47
LSM4-201ENST00000252816 DMDP11532 3685 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 SCAMP3O14828 347 aaKnown RBP24.22■■□□□ 1.47
LSM4-201ENST00000252816 SP9P0CG40 484 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 NBL1P41271 181 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 MRE11P49959 708 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 GAS6Q14393 721 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 RRAGAQ7L523 313 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 CREBRFQ8IUR6 639 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 ANKRD52Q8NB46 1076 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 INTS2Q9H0H0 1204 aaKnown RBP24.22■■□□□ 1.47
LSM4-201ENST00000252816 NMUR1Q9HB89 426 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 TLR8Q9NR97 1041 aaKnown RBP24.22■■□□□ 1.47
LSM4-201ENST00000252816 CFAP97Q9P2B7 532 aa24.22■■□□□ 1.47
LSM4-201ENST00000252816 RNF225M0QZC1 329 aaPredicted RBP24.21■■□□□ 1.47
LSM4-201ENST00000252816 LAMTOR5O43504 91 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 TLR5O60602 858 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 CD19P15391 556 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 GOLGA7BQ2TAP0 167 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 SGO2Q562F6 1265 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 NAIF1Q69YI7 327 aaPredicted RBP24.21■■□□□ 1.47
LSM4-201ENST00000252816 TMEM270Q6UE05 265 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 CPA6Q8N4T0 437 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 ATP2A3Q93084 1043 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 KREMEN1Q96MU8 473 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 TSPAN16Q9UKR8 245 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 PCDHB4Q9Y5E5 795 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 USP3Q9Y6I4 520 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 USP34Q70CQ2 3546 aa24.21■■□□□ 1.47
LSM4-201ENST00000252816 ZFHX2Q9C0A1 2572 aaPredicted RBP24.2■■□□□ 1.47
LSM4-201ENST00000252816 A0A1W2PQH9 124 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 TBX18O95935 607 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 GJA4P35212 333 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 CCINQ13939 588 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 PIGZQ86VD9 579 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 KIAA1958Q8N8K9 716 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 TFAP2BQ92481 460 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 UBXN6Q9BZV1 441 aa24.2■■□□□ 1.46
LSM4-201ENST00000252816 PROB1E7EW31 1015 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 TULP2O00295 520 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 O00370 1275 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 VDRP11473 427 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 GCNT1Q02742 428 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 LRRC32Q14392 662 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 TMEM196Q5HYL7 178 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 FSTL4Q6MZW2 842 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 Q6ZS52 159 aa24.19■■□□□ 1.46
LSM4-201ENST00000252816 CCDC186Q7Z3E2 898 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms