RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 MSS51Q4VC12 460 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 NAIF1Q69YI7 327 aaPredicted RBP15.7■□□□□ 0.1
SAFB2-201ENST00000252542 PLEKHH3Q7Z736 793 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 BEST2Q8NFU1 509 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 NOD1Q9Y239 953 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 CASTOR2A6NHX0 329 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 SIGLEC16A6NMB1 481 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 ITGBL1O95965 494 aaPredicted RBP15.7■□□□□ 0.1
SAFB2-201ENST00000252542 KITP10721 976 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 PSEN1P49768 467 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 CACNB2Q08289 660 aaPredicted RBP15.7■□□□□ 0.1
SAFB2-201ENST00000252542 BMPR2Q13873 1038 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 CYP1B1Q16678 543 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 CES3Q6UWW8 571 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 CXCL17Q6UXB2 119 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 EXOC8Q8IYI6 725 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 SEC14L1Q92503 715 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 VCPIP1Q96JH7 1222 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 TRIM33Q9UPN9 1127 aa15.7■□□□□ 0.1
SAFB2-201ENST00000252542 CILPO75339 1184 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 ARL4CP56559 192 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 ZBTB16Q05516 673 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 TLK2Q86UE8 772 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 BBOF1Q8ND07 529 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 PEBP4Q96S96 227 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 ECT2Q9H8V3 914 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 LRRC4Q9HBW1 653 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 MFHAS1Q9Y4C4 1052 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 A8MUI8 341 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 FAM189A1O60320 539 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 INHBAP08476 426 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 SMIM10L2AP0DMW4 78 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 SMIM10L2BP0DMW5 78 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 CLDN10P78369 228 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 AP1B1Q10567 949 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 KLF1Q13351 362 aaPredicted RBP15.69■□□□□ 0.1
SAFB2-201ENST00000252542 MAML3Q96JK9 1138 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 C16orf70Q9BSU1 422 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 COL11A1P12107 1806 aaPredicted RBP15.69■□□□□ 0.1
SAFB2-201ENST00000252542 A0A0G2JND7 137 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 HUS1O60921 280 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 LSM8O95777 96 aaKnown RBP15.69■□□□□ 0.1
SAFB2-201ENST00000252542 MMP3P08254 477 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 VDRP11473 427 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 AMPD1P23109 780 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 ELK3P41970 407 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 USP50Q70EL3 339 aaPredicted RBP15.69■□□□□ 0.1
SAFB2-201ENST00000252542 ZNF354CQ86Y25 554 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 MAP7D3Q8IWC1 876 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 LRRC8CQ8TDW0 803 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 TMEM40Q8WWA1 233 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 PGM2Q96G03 612 aa15.69■□□□□ 0.1
SAFB2-201ENST00000252542 DDX56Q9NY93 547 aaKnown RBP15.69■□□□□ 0.1
SAFB2-201ENST00000252542 MARCOQ9UEW3 520 aaPredicted RBP15.69■□□□□ 0.1
SAFB2-201ENST00000252542 IGF2BP3O00425 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
SAFB2-201ENST00000252542 TNPO2O14787 897 aaKnown RBP15.68■□□□□ 0.1
SAFB2-201ENST00000252542 GAS2O43903 313 aaKnown RBP15.68■□□□□ 0.1
SAFB2-201ENST00000252542 MCF2P10911 925 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 RPA3P35244 121 aaPredicted RBP15.68■□□□□ 0.1
SAFB2-201ENST00000252542 GPD2P43304 727 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 NDUFV1P49821 464 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 XRCC4Q13426 336 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 CDCA2Q69YH5 1023 aaPredicted RBP15.68■□□□□ 0.1
SAFB2-201ENST00000252542 CCDC125Q86Z20 511 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 AGAP11Q8TF27 550 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 DEPDC1BQ8WUY9 529 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 EDEM1Q92611 657 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 TLCD1Q96CP7 247 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 APOL2Q9BQE5 337 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 SIK2Q9H0K1 926 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 USP12O75317 370 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 CYP3A5P20815 502 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 SLC26A2P50443 739 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 AFF1P51825 1210 aaKnown RBP15.68■□□□□ 0.1
SAFB2-201ENST00000252542 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 TTC30AQ86WT1 665 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 GGA2Q9UJY4 613 aa15.68■□□□□ 0.1
SAFB2-201ENST00000252542 ABLIM1O14639 778 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 LGR5O75473 907 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 MMP13P45452 471 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 ABCG1P45844 678 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 IL9RQ01113 521 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 ARHGEF18Q6ZSZ5 1173 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 STKLD1Q8NE28 680 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.67■□□□□ 0.1
SAFB2-201ENST00000252542 KLHL14Q9P2G3 628 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 PHIPQ8WWQ0 1821 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 IQCA1LA6NCM1 817 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 CSPG5O95196 566 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 GTF2A2P52657 109 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 MAP3K7CLP57077 242 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 GBE1Q04446 702 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 LVRNQ6Q4G3 990 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 EIF1ADQ8N9N8 165 aaKnown RBP15.67■□□□□ 0.1
SAFB2-201ENST00000252542 TXLNGYQ9BZA5 131 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 ADAM7Q9H2U9 754 aa15.67■□□□□ 0.1
SAFB2-201ENST00000252542 ABHD16BQ9H3Z7 469 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms