RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 GBA2Q9HCG7 927 aaPredicted RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 PLXNB2O15031 1838 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 IQCA1LA6NCM1 817 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 CCDC14Q49A88 953 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 PYROXD1Q8WU10 500 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 EMID1Q96A84 441 aaPredicted RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 VRTNQ9H8Y1 702 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 NKIRAS1Q9NYS0 192 aa16.47■□□□□ 0.23
LRFN1-201ENST00000248668 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.47■□□□□ 0.23
LRFN1-201ENST00000248668 TREHO43280 583 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 AVILO75366 819 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 CYP4V2Q6ZWL3 525 aaPredicted RBP16.46■□□□□ 0.23
LRFN1-201ENST00000248668 CMASQ8NFW8 434 aaPredicted RBP16.46■□□□□ 0.23
LRFN1-201ENST00000248668 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 FLRT1Q9NZU1 646 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 XPO7Q9UIA9 1087 aaKnown RBP16.46■□□□□ 0.23
LRFN1-201ENST00000248668 CHMP2BQ9UQN3 213 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 COL1A2P08123 1366 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 SYNJ2BP-COX16A0A087WUM0 186 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 A0A1W2PPM1 405 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 GOLGA8RI6L899 631 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 GABBR2O75899 941 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 PTPN7P35236 360 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 GABRB2P47870 512 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 GPX6P59796 221 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 E2F5Q15329 346 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 OLFML2BQ68BL8 750 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 P3H4Q92791 437 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 TGS1Q96RS0 853 aaKnown RBP16.46■□□□□ 0.23
LRFN1-201ENST00000248668 C12orf65Q9H3J6 166 aaKnown RBP16.46■□□□□ 0.23
LRFN1-201ENST00000248668 COX16Q9P0S2 106 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 HESX1Q9UBX0 185 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 NR2E3Q9Y5X4 410 aa16.46■□□□□ 0.23
LRFN1-201ENST00000248668 APOC4-APOC2K7ER74 178 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.22
LRFN1-201ENST00000248668 GPR32O75388 356 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 APOC2P02655 101 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 MYL3P08590 195 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 CYP2B6P20813 491 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 IGFBP6P24592 240 aaPredicted RBP16.46■□□□□ 0.22
LRFN1-201ENST00000248668 DPYSL3Q14195 570 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 FBXO36Q8NEA4 188 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 SNX27Q96L92 541 aa16.46■□□□□ 0.22
LRFN1-201ENST00000248668 WDR83Q9BRX9 315 aaKnown RBP16.46■□□□□ 0.22
LRFN1-201ENST00000248668 CLUHO75153 1309 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 TRIP12Q14669 1992 aaPredicted RBP16.45■□□□□ 0.22
LRFN1-201ENST00000248668 RABGGTBP53611 331 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 ROR1Q01973 937 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 SOWAHAQ2M3V2 549 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 ANKRD20A8PQ5CZ79 823 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 C3orf62Q6ZUJ4 267 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 ZNF410Q86VK4 478 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 PPIL6Q8IXY8 311 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 ANKS4BQ8N8V4 417 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 GTF3C2Q8WUA4 911 aaPredicted RBP16.45■□□□□ 0.22
LRFN1-201ENST00000248668 ABCF3Q9NUQ8 709 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 SHOC2Q9UQ13 582 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 SPTLC1O15269 473 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 SDC4P31431 198 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 NOTUMQ6P988 496 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 TLK2Q86UE8 772 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
LRFN1-201ENST00000248668 TTC13Q8NBP0 860 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 MAML1Q92585 1016 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 FAXDC2Q96IV6 333 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 PARK7Q99497 189 aaKnown RBP16.45■□□□□ 0.22
LRFN1-201ENST00000248668 TRABDQ9H4I3 376 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 SH3BP1Q9Y3L3 701 aa16.45■□□□□ 0.22
LRFN1-201ENST00000248668 FARP1Q9Y4F1 1045 aaPredicted RBP16.45■□□□□ 0.22
LRFN1-201ENST00000248668 FGFR1P11362 822 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 OLFML1Q6UWY5 402 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 BEST2Q8NFU1 509 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 RSAD1Q9HA92 442 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 ALOX15BO15296 676 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 KCNN4O15554 427 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 IGDCC3Q8IVU1 814 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 PALM2Q8IXS6 379 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 SNRNP25Q9BV90 132 aaKnown RBP16.44■□□□□ 0.22
LRFN1-201ENST00000248668 LGALS13Q9UHV8 139 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 MCM8Q9UJA3 840 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 RPSAP08865 295 aaKnown RBP16.44■□□□□ 0.22
LRFN1-201ENST00000248668 ACAT1P24752 427 aaKnown RBP16.44■□□□□ 0.22
LRFN1-201ENST00000248668 ARL4CP56559 192 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 C9orf57Q5W0N0 161 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 SPRYD7Q5W111 196 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 YTHDF3Q7Z739 585 aaKnown RBP16.44■□□□□ 0.22
LRFN1-201ENST00000248668 PIGWQ7Z7B1 504 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 NAT8LQ8N9F0 302 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 FBF1Q8TES7 1133 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 HAUS2Q9NVX0 235 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
LRFN1-201ENST00000248668 DARSP14868 501 aaKnown RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 FOXN2P32314 431 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 SCTRP47872 440 aa16.43■□□□□ 0.22
LRFN1-201ENST00000248668 WDR4P57081 412 aaKnown RBP16.43■□□□□ 0.22
LRFN1-201ENST00000248668 SOX4Q06945 474 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms