RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 NFE2Q16621 373 aaPredicted RBP16.37■□□□□ 0.21
SIN3B-201ENST00000248054 FAM172AQ8WUF8 416 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 ZBTB18Q99592 522 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 CCNE2O96020 404 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 TGM2P21980 687 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 NDST1P52848 882 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 KYNUQ16719 465 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 HOMEZQ8IX15 550 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 EFHBQ8N7U6 833 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 PPTC7Q8NI37 304 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 NAT9Q9BTE0 207 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 MYH3P11055 1940 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 M0QYT0 321 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 NNMTP40261 264 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 LRRC38Q5VT99 294 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 NAPEPLDQ6IQ20 393 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 ATP6V0D2Q8N8Y2 350 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 NAF1Q96HR8 494 aaKnown RBP16.37■□□□□ 0.21
SIN3B-201ENST00000248054 CFLARO15519 480 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 TRPA1O75762 1119 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 ZNF135P52742 658 aaPredicted RBP16.37■□□□□ 0.21
SIN3B-201ENST00000248054 ACCSLQ4AC99 568 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 DNAL1Q4LDG9 190 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 HP1BP3Q5SSJ5 553 aaPredicted RBP16.37■□□□□ 0.21
SIN3B-201ENST00000248054 ARHGAP22Q7Z5H3 698 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 NKX2-3Q8TAU0 364 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 SKA2Q8WVK7 121 aaPredicted RBP16.37■□□□□ 0.21
SIN3B-201ENST00000248054 SEPT8Q92599 483 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
SIN3B-201ENST00000248054 TMBIM4Q9HC24 238 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 TSPAN16Q9UKR8 245 aa16.37■□□□□ 0.21
SIN3B-201ENST00000248054 TISP43B9A030 160 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 NFKBIEO00221 500 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 EPHB6O15197 1021 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 POLBP06746 335 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 TNFRSF8P28908 595 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 OCRLQ01968 901 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 SLC29A2Q14542 456 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 LONRF1Q17RB8 773 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 FAM110CQ1W6H9 321 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 SLFN11Q7Z7L1 901 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 MFN1Q8IWA4 741 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 TMEM86AQ8N2M4 240 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 FAM71DQ8N9W8 422 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 RXFP2Q8WXD0 754 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 IRF2BP2Q7Z5L9 587 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 KATNAL2Q8IYT4 538 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 PCDH9Q9HC56 1237 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 NCAM2O15394 837 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 SNRPAP09012 282 aaKnown RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 SESN2P58004 480 aaPredicted RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 TDRD10Q5VZ19 366 aaKnown RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 C3orf62Q6ZUJ4 267 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 CALML6Q8TD86 181 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 PURBQ96QR8 312 aaKnown RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 FAM124BQ9H5Z6 455 aaPredicted RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 WDCPQ9H6R7 721 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 ATXN2Q99700 1313 aaKnown RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 GEMIN4P57678 1058 aaKnown RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 APLFQ8IW19 511 aaPredicted RBP16.36■□□□□ 0.21
SIN3B-201ENST00000248054 APBA2Q99767 749 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 SPON2Q9BUD6 331 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 DDIT4Q9NX09 232 aa16.36■□□□□ 0.21
SIN3B-201ENST00000248054 ZBBXA8MT70 800 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 SLC4A1P02730 911 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 GMLQ99445 158 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 ANXA9O76027 345 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 OTUD4Q01804 1114 aaKnown RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 DNAJC9Q8WXX5 260 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 DERAQ9Y315 318 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 RIPK3Q9Y572 518 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 MICAL2O94851 1124 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 LCA5LO95447 670 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 EGFRP00533 1210 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 CYBBP04839 570 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 HNRNPCP07910 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 GHRP10912 638 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 VCPP55072 806 aaKnown RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 GPR20Q99678 358 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 DCLK3Q9C098 648 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 GDF3Q9NR23 364 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 SHOC2Q9UQ13 582 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 SPRP35270 261 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 RPL10AP62906 217 aaKnown RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 CNGA2Q16280 664 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 TTC39BQ5VTQ0 682 aaPredicted RBP16.35■□□□□ 0.21
SIN3B-201ENST00000248054 CDT1Q9H211 546 aa16.35■□□□□ 0.21
SIN3B-201ENST00000248054 MSCO60682 206 aa16.34■□□□□ 0.21
SIN3B-201ENST00000248054 PHF13Q86YI8 300 aaPredicted RBP16.34■□□□□ 0.21
SIN3B-201ENST00000248054 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms