RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ZNF302Q9NR11 478 aa17.57■□□□□ 0.4
SGPP1-201ENST00000247225 MAN1C1Q9NR34 630 aa17.57■□□□□ 0.4
SGPP1-201ENST00000247225 LRCH1Q9Y2L9 728 aa17.57■□□□□ 0.4
SGPP1-201ENST00000247225 SBF2Q86WG5 1849 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 WFS1O76024 890 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 ZBED1O96006 694 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 RBL1P28749 1068 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 SP2Q02086 613 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 ZC3H12AQ5D1E8 599 aaKnown RBP17.56■□□□□ 0.4
SGPP1-201ENST00000247225 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 KCNK13Q9HB14 408 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 HMGXB4Q9UGU5 601 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 SNCAIPQ9Y6H5 919 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 LMNAP02545 664 aaKnown RBP17.56■□□□□ 0.4
SGPP1-201ENST00000247225 PDGFRAP16234 1089 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 TBXAS1P24557 533 aaPredicted RBP17.56■□□□□ 0.4
SGPP1-201ENST00000247225 ARFGAP1Q8N6T3 406 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 IFT122Q9HBG6 1241 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 CYTH4Q9UIA0 394 aa17.56■□□□□ 0.4
SGPP1-201ENST00000247225 MRPL42Q9Y6G3 142 aaKnown RBP17.56■□□□□ 0.4
SGPP1-201ENST00000247225 MYO18AQ92614 2054 aaKnown RBP17.56■□□□□ 0.4
SGPP1-201ENST00000247225 CFLARO15519 480 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 ITGAVP06756 1048 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 DLDP09622 509 aaKnown RBP17.55■□□□□ 0.4
SGPP1-201ENST00000247225 GTF2A2P52657 109 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 RSBN1LQ6PCB5 846 aaPredicted RBP17.55■□□□□ 0.4
SGPP1-201ENST00000247225 C7orf31Q8N865 590 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 NAT8LQ8N9F0 302 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 PGBD4Q96DM1 585 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 USP18Q9UMW8 372 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 SMAPO00193 183 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 DGKIO75912 1065 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 KRT37O76014 449 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 ACADSP16219 412 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 TMEM192Q8IY95 271 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 ARHGAP24Q8N264 748 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 RNF217Q8TC41 542 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 DEPDC1BQ8WUY9 529 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 TUBGCP5Q96RT8 1024 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 ZNF184Q99676 751 aaPredicted RBP17.55■□□□□ 0.4
SGPP1-201ENST00000247225 VPS11Q9H270 941 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 SLC38A10Q9HBR0 1119 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 SAR1AQ9NR31 198 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 DUOXA2Q1HG44 320 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 RABGAP1LQ5R372 815 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 PCGF5Q86SE9 256 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 SLC35B2Q8TB61 432 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 APOPT1Q96IL0 206 aa17.55■□□□□ 0.4
SGPP1-201ENST00000247225 PIWIL1Q96J94 861 aaKnown RBP17.55■□□□□ 0.4
SGPP1-201ENST00000247225 B4GALT5O43286 388 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 KRT7P08729 469 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 POLR2BP30876 1174 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 PDE1BQ01064 536 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 ASPHQ12797 758 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 MPP5Q8N3R9 675 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 NMD3Q96D46 503 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 CGRRF1Q99675 332 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 FOXP3Q9BZS1 431 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 C20orf27Q9GZN8 174 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 ST6GALNAC4Q9H4F1 302 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 KRT82Q9NSB4 513 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 ARHGAP28Q9P2N2 729 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 ZC3H11AO75152 810 aaKnown RBP eCLIP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 BTKQ06187 659 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 SAMD7Q7Z3H4 446 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 VSIG10LQ86VR7 867 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 TDRPQ86YL5 185 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 PTCD3Q96EY7 689 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 NIF3L1Q9GZT8 377 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 DDX56Q9NY93 547 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 DNAJC16Q9Y2G8 782 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 PRPSAP2O60256 369 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 PGM3O95394 542 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 HMGCRP04035 888 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 ANPEPP15144 967 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 RANBP1P43487 201 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 BCAR1P56945 870 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 STX3Q13277 289 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 XKR3Q5GH77 459 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 CIAPIN1Q6FI81 312 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 ULK2Q8IYT8 1036 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 NSUN6Q8TEA1 469 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 UNKQ9C0B0 810 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 FAM49BQ9NUQ9 324 aa17.54■□□□□ 0.4
SGPP1-201ENST00000247225 DRG1Q9Y295 367 aaKnown RBP17.54■□□□□ 0.4
SGPP1-201ENST00000247225 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
SGPP1-201ENST00000247225 NEMP1O14524 444 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 TM9SF1O15321 606 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 RGS20O76081 388 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 ITGBL1O95965 494 aaPredicted RBP17.53■□□□□ 0.4
SGPP1-201ENST00000247225 PROCP04070 461 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 ERBB2P04626 1255 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 TRIP10Q15642 601 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 C12orf29Q8N999 325 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 PANX3Q96QZ0 392 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 SLC7A8Q9UHI5 535 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 GOLGA8QA0A0J9YX86 632 aa17.53■□□□□ 0.4
SGPP1-201ENST00000247225 GOLGA8OA6NCC3 632 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms