RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CUL1Q13616 776 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 COL4A6Q14031 1691 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 TAZQ16635 292 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 CCDC142Q17RM4 750 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 ZNF280DQ6N043 979 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 SPOCD1Q6ZMY3 1216 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 GRK7Q8WTQ7 553 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 SEC14L1Q92503 715 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 MAGOHBQ96A72 148 aaKnown RBP14.86□□□□□ -0.03
SDF2-201ENST00000247020 TRIM62Q9BVG3 475 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 FRMD8P1Q9BZ68 369 aaPredicted RBP14.86□□□□□ -0.03
SDF2-201ENST00000247020 MARCH5Q9NX47 278 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 RRN3Q9NYV6 651 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 NR2E1Q9Y466 385 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 BRCA2P51587 3418 aa14.86□□□□□ -0.03
SDF2-201ENST00000247020 hCG_1818297A0A087WSY0 165 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 F8W810 466 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 H7C4K7 107 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 MDM4O15151 490 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 PRPSAP2O60256 369 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 DGKIO75912 1065 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 BAIAP3O94812 1187 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 ENDOD1O94919 500 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 GALTP07902 379 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 HSPA1AP0DMV8 641 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 HSPA1BP0DMV9 641 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 IL1R2P27930 398 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 NOS2P35228 1153 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 GJC1P36383 396 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 COILP38432 576 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 CDKN2BP42772 138 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 SLC11A1P49279 550 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 DAOAP59103 153 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 YWHAZP63104 245 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 DR1Q01658 176 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 CCNG2Q16589 344 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 BEND6Q5SZJ8 279 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 ZFYVE27Q5T4F4 411 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 MFSD5Q6N075 450 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 DRICH1Q6PGQ1 229 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 CCDC137Q6PK04 289 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 MFSD7Q6UXD7 560 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 SPATA2LQ8IUW3 424 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 ZDHHC14Q8IZN3 488 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 FAM172AQ8WUF8 416 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 HDAC7Q8WUI4 952 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 VWCEQ96DN2 955 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 CFAP57Q96MR6 1250 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 SLC2A13Q96QE2 648 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 POPDC2Q9HBU9 364 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 AMACRQ9UHK6 382 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 STAP1Q9ULZ2 295 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 UTP11Q9Y3A2 253 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 LRRD1A4D1F6 860 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 C3orf70A6NLC5 250 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 GRAP2O75791 330 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 AMHP03971 560 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 KDELR1P24390 212 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 GBP1P32455 592 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 EPHB4P54760 987 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 DRG2P55039 364 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 RBM10P98175 930 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 SLC7A5Q01650 507 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 PDK2Q15119 407 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 TAF5Q15542 800 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 SLC25A52Q3SY17 297 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 ATP13A4Q4VNC1 1196 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 VARS2Q5ST30 1063 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 TXNRD3NBQ6F5E7 133 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 PM20D1Q6GTS8 502 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 FUT10Q6P4F1 479 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 VSTM1Q6UX27 236 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 SYDE1Q6ZW31 735 aaPredicted RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 ADAT2Q7Z6V5 191 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 PSTKQ8IV42 348 aaKnown RBP14.85□□□□□ -0.03
SDF2-201ENST00000247020 MAP7D3Q8IWC1 876 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 TMEM199Q8N511 208 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 CLEC4CQ8WTT0 213 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 TOP1MTQ969P6 601 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 NT5C3BQ969T7 300 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 EPB41L5Q9HCM4 733 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 FAM114A2Q9NRY5 505 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 PLXNA3P51805 1871 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 MYO16Q9Y6X6 1858 aa14.85□□□□□ -0.03
SDF2-201ENST00000247020 TCRBV7S2A1N4TA0A589 114 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 ZBED1O96006 694 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 BDNFP23560 247 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 MAGEA11P43364 429 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 GATMP50440 423 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 GUCY2DQ02846 1103 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 LMNB2Q03252 620 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 NNTQ13423 1086 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 FAM171A1Q5VUB5 890 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 EMBQ6PCB8 327 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.84□□□□□ -0.03
SDF2-201ENST00000247020 BNIPLQ7Z465 357 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 LRRTM3Q86VH5 581 aa14.84□□□□□ -0.03
SDF2-201ENST00000247020 TTC13Q8NBP0 860 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms