RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TMEM110Q86TL2 294 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 CXorf56Q9H5V9 222 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 VPS37BQ9H9H4 285 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 SMG5Q9UPR3 1016 aaKnown RBP22.88■■□□□ 1.25
RNF39-201ENST00000244360 NME7Q9Y5B8 376 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 KAT6AQ92794 2004 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 RBP3P10745 1247 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 TAC1P20366 129 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 CDH6P55285 790 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 GPX6P59796 221 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 TFDP2Q14188 446 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 ZKSCAN8Q15776 578 aaPredicted RBP22.88■■□□□ 1.25
RNF39-201ENST00000244360 C15orf59Q2T9L4 293 aaPredicted RBP22.88■■□□□ 1.25
RNF39-201ENST00000244360 CCDC14Q49A88 953 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 RAB6CQ53S08 254 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 FAM47CQ5HY64 1035 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 EFHC2Q5JST6 749 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 PMF1Q6P1K2 205 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 ALKAL1Q6UXT8 129 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 CATSPER4Q7RTX7 472 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 NPLOC4Q8TAT6 608 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 PARK7Q99497 189 aaKnown RBP22.88■■□□□ 1.25
RNF39-201ENST00000244360 EIF2AQ9BY44 585 aaKnown RBP22.88■■□□□ 1.25
RNF39-201ENST00000244360 RAB6CQ9H0N0 254 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 ARHGEF3Q9NR81 526 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 CNTN3Q9P232 1028 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 TUBGCP4Q9UGJ1 667 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 SNX9Q9Y5X1 595 aa22.88■■□□□ 1.25
RNF39-201ENST00000244360 SCN1AP35498 2009 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.87■■□□□ 1.25
RNF39-201ENST00000244360 MBLAC1A4D2B0 266 aaPredicted RBP22.87■■□□□ 1.25
RNF39-201ENST00000244360 A6NJR5 290 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 PRPSAP2O60256 369 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 F2P00734 622 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 GAD2Q05329 585 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 MMRN1Q13201 1228 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 RGS9BPQ6ZS82 235 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 UNC93AQ86WB7 457 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 FAM71DQ8N9W8 422 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 BEST2Q8NFU1 509 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 SPATA18Q8TC71 538 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 STK32AQ8WU08 396 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 SLC35F5Q8WV83 523 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 TEKT4Q8WW24 435 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 PITPNM3Q9BZ71 974 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 STARD13Q9Y3M8 1113 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 NRCAMQ92823 1304 aa22.87■■□□□ 1.25
RNF39-201ENST00000244360 IGF2BP3O00425 579 aaKnown RBP eCLIP22.86■■□□□ 1.25
RNF39-201ENST00000244360 HP1BP3Q5SSJ5 553 aaPredicted RBP22.86■■□□□ 1.25
RNF39-201ENST00000244360 FNBP1LQ5T0N5 605 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 ARHGAP17Q68EM7 881 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 NOTUMQ6P988 496 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 ACOT1Q86TX2 421 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 VSIG1Q86XK7 387 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 FITM2Q8N6M3 262 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 FBF1Q8TES7 1133 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 KHSRPQ92945 711 aaKnown RBP eCLIP22.86■■□□□ 1.25
RNF39-201ENST00000244360 WDR83Q9BRX9 315 aaKnown RBP22.86■■□□□ 1.25
RNF39-201ENST00000244360 FAM49AQ9H0Q0 323 aaPredicted RBP22.86■■□□□ 1.25
RNF39-201ENST00000244360 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.86■■□□□ 1.25
RNF39-201ENST00000244360 SMIM35A0A1B0GVV1 85 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 SLC15A5A6NIM6 579 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 GOLGA8MH3BSY2 632 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 PIK3R2O00459 728 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 TMEM63AO94886 807 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 SMIM10L2AP0DMW4 78 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 SMIM10L2BP0DMW5 78 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 CCNB1P14635 433 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 STIP1P31948 543 aaKnown RBP22.86■■□□□ 1.25
RNF39-201ENST00000244360 ELF1P32519 619 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 RGS7P49802 495 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 YARSP54577 528 aaKnown RBP22.86■■□□□ 1.25
RNF39-201ENST00000244360 KCNJ2P63252 427 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 FKBP1BP68106 108 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 ROR1Q01973 937 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 PDK2Q15119 407 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 E2F5Q15329 346 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 MSS51Q4VC12 460 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 CGB2Q6NT52 195 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 SESTD1Q86VW0 696 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 GPATCH11Q8N954 259 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 ATP11CQ8NB49 1132 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 RNF157Q96PX1 679 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 CDHR5Q9HBB8 845 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 TRIP11Q15643 1979 aa22.86■■□□□ 1.25
RNF39-201ENST00000244360 BANF1O75531 89 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 ATP5HO75947 161 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 ASMTLO95671 621 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 DARSP14868 501 aaKnown RBP22.85■■□□□ 1.25
RNF39-201ENST00000244360 TSHRP16473 764 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 SLC6A3Q01959 620 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 TMEM62Q0P6H9 643 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 IRF5Q13568 498 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 SPARCL1Q14515 664 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 BOLA3Q53S33 107 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 ASRGL1Q7L266 308 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 TBCBQ99426 244 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 MAK16Q9BXY0 300 aaKnown RBP22.85■■□□□ 1.25
RNF39-201ENST00000244360 EBF2Q9HAK2 575 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 POC1B-GALNT4F8VUJ3 575 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms