RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HALP42357 657 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 CDK20Q8IZL9 346 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 UNKQ9C0B0 810 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 ZNF286BP0CG31 522 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 RESTQ13127 1097 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 KIF2BQ8N4N8 673 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 FAM45AQ8TCE6 357 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 THG1LQ9NWX6 298 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 TARSP26639 723 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 SARSP49591 514 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 SEZ6Q53EL9 994 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 MIR1-1HGQ9H1L0 117 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 USP11P51784 963 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 RBBP8NLQ8NC74 664 aaPredicted RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 CELF1Q92879 486 aaKnown RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 C9orf72Q96LT7 481 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 CCDC134Q9H6E4 229 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 KLHL2O95198 593 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 FNDC3BQ53EP0 1204 aaKnown RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 IQCF2Q8IXL9 164 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 COQ7Q99807 217 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 RMND5AQ9H871 391 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 MAGEB2O15479 319 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 LTKP29376 864 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 EPC2Q52LR7 807 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 WLSQ5T9L3 541 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 HERC6Q8IVU3 1022 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 CASP10Q92851 521 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 RHBGQ9H310 441 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 DCP1AQ9NPI6 582 aaPredicted RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 RCOR1Q9UKL0 485 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 TCOF1Q13428 1488 aaKnown RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 PZPP20742 1482 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 ERI2A8K979 691 aaKnown RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 PHF2O75151 1096 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 ZNF189O75820 626 aaPredicted RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 BMP10O95393 424 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 ZNF544Q6NX49 715 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 KRT35Q92764 455 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 RHBDL2Q9NX52 303 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 TTC26A0AVF1 554 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 OR6B1O95007 311 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 CD2BP2O95400 341 aaKnown RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 IL6P05231 212 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 UBASH3BQ8TF42 649 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 REEP2Q9BRK0 252 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 GPR108Q9NPR9 543 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 SMIM5Q71RC9 77 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 TMEM39BQ9GZU3 492 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 NT5MQ9NPB1 228 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 ZNF624Q9P2J8 865 aaPredicted RBP13.63□□□□□ -0.23
NEK9-201ENST00000238616 VPS9D1Q9Y2B5 631 aa13.63□□□□□ -0.23
NEK9-201ENST00000238616 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 H3BN98 237 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 TAF5Q15542 800 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 TRIM16LQ309B1 348 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 DAB2IPQ5VWQ8 1189 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 OR6A2O95222 327 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 HNMTP50135 292 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 GRM4Q14833 912 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 MYO1HQ8N1T3 1032 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 SLC9A7Q96T83 725 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 CCDC189A1A4V9 331 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 HIST1H2ABP04908 130 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 FMO5P49326 533 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 CTCFP49711 727 aaPredicted RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 CYLC2Q14093 348 aaPredicted RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 DNAL1Q4LDG9 190 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 HIST3H2AQ7L7L0 130 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 BRSK2Q8IWQ3 736 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 HIST1H2ACQ93077 130 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 BBS4Q96RK4 519 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 PRKD2Q9BZL6 878 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 DNALI1O14645 258 aaPredicted RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 RHAGQ02094 409 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 DDR2Q16832 855 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 TMC7Q7Z402 723 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 NECAB2Q7Z6G3 386 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 OMDQ99983 421 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 RBM7Q9Y580 266 aaKnown RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 RPS6KL1Q9Y6S9 549 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 BIRC5O15392 142 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 FGRP09769 529 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
NEK9-201ENST00000238616 PTPN12Q05209 780 aaKnown RBP13.62□□□□□ -0.23
NEK9-201ENST00000238616 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms