RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GCOM2Q9BZD3 368 aaPredicted RBP13.52□□□□□ -0.24
MSH2-201ENST00000233146 ZBTB21Q9ULJ3 1066 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 LTN1O94822 1766 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 CDK2AP1O14519 115 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 MTA2O94776 668 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 CRYZL1O95825 349 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 XRCC5P13010 732 aaKnown RBP13.52□□□□□ -0.24
MSH2-201ENST00000233146 ENPP1P22413 925 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 TCHHL1Q5QJ38 904 aaPredicted RBP13.52□□□□□ -0.24
MSH2-201ENST00000233146 CCDC33Q8N5R6 958 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 ADAMTS16Q8TE57 1224 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 WRNIP1Q96S55 665 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 MYRFQ9Y2G1 1151 aa13.52□□□□□ -0.24
MSH2-201ENST00000233146 H3BMQ9 156 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 EML1O00423 815 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 MYO1DO94832 1006 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 ESRRGP62508 458 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 DLG4P78352 724 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 BNIP3Q12983 259 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 FASTKD3Q14CZ7 662 aaKnown RBP13.52□□□□□ -0.25
MSH2-201ENST00000233146 GRIK5Q16478 980 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 SETD3Q86TU7 594 aaPredicted RBP13.52□□□□□ -0.25
MSH2-201ENST00000233146 HM13Q8TCT9 377 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 COG8Q96MW5 612 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 RNF38Q9H0F5 515 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 OLAHQ9NV23 265 aa13.52□□□□□ -0.25
MSH2-201ENST00000233146 A0A1W2PPW3 197 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 GTPBP10A4D1E9 387 aaKnown RBP13.51□□□□□ -0.25
MSH2-201ENST00000233146 PHKA1P46020 1223 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 HSPA2P54652 639 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 CHRNEQ04844 493 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 LETM2Q2VYF4 491 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 CCDC58Q4VC31 144 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 IGFN1Q86VF2 1251 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 HEATR4Q86WZ0 1026 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 ZNF420Q8TAQ5 688 aaPredicted RBP13.51□□□□□ -0.25
MSH2-201ENST00000233146 C7orf26Q96N11 449 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 B3GNT4Q9C0J1 378 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 FKBP14Q9NWM8 211 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 DUOX1Q9NRD9 1551 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 GOLGA8RI6L899 631 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 KLHL41O60662 606 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 PROCP04070 461 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 ADSSP30520 456 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 STAT2P52630 851 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 GPC5P78333 572 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 GALNT2Q10471 571 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 PRKG1Q13976 671 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 DRAP1Q14919 205 aaPredicted RBP13.51□□□□□ -0.25
MSH2-201ENST00000233146 CRY1Q16526 586 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 PLEKHA7Q6IQ23 1121 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 NEK10Q6ZWH5 1172 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 ALPK1Q96QP1 1244 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 HERC2P3Q9BVR0 1158 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 GPR88Q9GZN0 384 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 AASDHPPTQ9NRN7 309 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 DAPK2Q9UIK4 370 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 DOCK2Q92608 1830 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 PSMD11O00231 422 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
MSH2-201ENST00000233146 NR4A1P22736 598 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 SLC16A2P36021 539 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 TMEM119Q4V9L6 283 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 FGD3Q5JSP0 725 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 METTL24Q5JXM2 366 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 ADGRD1Q6QNK2 874 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 LRRC59Q96AG4 307 aaKnown RBP13.51□□□□□ -0.25
MSH2-201ENST00000233146 SEPT11Q9NVA2 429 aaKnown RBP13.51□□□□□ -0.25
MSH2-201ENST00000233146 ITGA11Q9UKX5 1188 aa13.51□□□□□ -0.25
MSH2-201ENST00000233146 SDR42E2A6NKP2 422 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 CXCR2P25025 360 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 STX3Q13277 289 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 GPR162Q16538 588 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 TTC17Q96AE7 1141 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 KLF6Q99612 283 aaPredicted RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 MOSPD1Q9UJG1 213 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 CNOT11Q9UKZ1 510 aaKnown RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 KIAA1257Q9ULG3 409 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 DNM3Q9UQ16 869 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 ATP11BQ9Y2G3 1177 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 ICMTO60725 284 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 BBOX1O75936 387 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 UFL1O94874 794 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 MSL3P1P0C860 447 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 COPAP53621 1224 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 AQP5P55064 265 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 AARS2Q5JTZ9 985 aaKnown RBP13.5□□□□□ -0.25
MSH2-201ENST00000233146 KAZNQ674X7 775 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 OSTM1Q86WC4 334 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 CARM1Q86X55 608 aa13.5□□□□□ -0.25
MSH2-201ENST00000233146 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms