RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PTPN4P29074 926 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 ST8SIA6P61647 398 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 TCHHL1Q5QJ38 904 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 ZNF333Q96JL9 665 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 CATSPER2Q96P56 530 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 MYOZ2Q9NPC6 264 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 MTSS1O43312 755 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 LZTS3O60299 673 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 VTNP04004 478 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 GEMP55040 296 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PTENP60484 403 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PGS1Q32NB8 556 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 SLC30A10Q6XR72 485 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 ZNF513Q8N8E2 541 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 GPRASP2Q96D09 838 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 FRMD8Q9BZ67 464 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 DCLRE1BQ9H816 532 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 A0A087X0B3 334 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 MAFGO15525 162 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 AP1G2O75843 785 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PROSCO94903 275 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PARNO95453 639 aaKnown RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 MT-CO1P00395 513 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 HARS2P49590 506 aaKnown RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 CLCN3P51790 818 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 IFI35P80217 286 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 CYP24A1Q07973 514 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 ST3GAL1Q11201 340 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 NFYCQ13952 458 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 ZNF720Q7Z2F6 126 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 FRMD8P1Q9BZ68 369 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 APPL1Q9UKG1 709 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PDE5AO76074 875 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 ACO1P21399 889 aaKnown RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 LAMC2Q13753 1193 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DDX39BQ13838 428 aaKnown RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 KBTBD12Q3ZCT8 623 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 SLFN11Q7Z7L1 901 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DDHD1Q8NEL9 900 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 SLC5A5Q92911 643 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 FICDQ9BVA6 458 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 EIF3LQ9Y262 564 aaKnown RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 SEC23AQ15436 765 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 NTRK3Q16288 839 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DGKDQ16760 1214 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 YAF2Q8IY57 180 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 CGRRF1Q99675 332 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 ATP6V1B2P21281 511 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 CEP78Q5JTW2 689 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DCP1BQ8IZD4 617 aaKnown RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 STKLD1Q8NE28 680 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 GPRC5DQ9NZD1 345 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 C2CD2LO14523 706 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 SREBF1P36956 1147 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 MYL6P60660 151 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 ZNF844Q08AG5 666 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 CSHL1Q14406 222 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 PDK2Q15119 407 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 EFL1Q7Z2Z2 1120 aaKnown RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 SAMD7Q7Z3H4 446 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 SLC26A11Q86WA9 606 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 TBC1D19Q8N5T2 526 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 MRGBPQ9NV56 204 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 OGTO15294 1046 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 RGS5O15539 181 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 VDRP11473 427 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 GCLCP48506 637 aaPredicted RBP13.81□□□□□ -0.2
NEK4-201ENST00000233027 SLC16A1P53985 500 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 CCNG2Q16589 344 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 Q4G0T1 1027 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 TMC3Q7Z5M5 1100 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 FAM131BQ86XD5 332 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 KCTD17Q8N5Z5 321 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 EXD1Q8NHP7 514 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 DDI1Q8WTU0 396 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 AP4E1Q9UPM8 1137 aa13.81□□□□□ -0.2
NEK4-201ENST00000233027 CEP170BQ9Y4F5 1589 aaPredicted RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 MAPRE1Q15691 268 aaKnown RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 C3orf67Q6ZVT6 689 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 IL1RAPL1Q9NZN1 696 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 SAC3D1A6NKF1 404 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 TM9SF1O15321 606 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 STX7O15400 261 aaKnown RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 CYP51A1Q16850 503 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 PRCCQ92733 491 aaPredicted RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 SEMA4DQ92854 862 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 PTPRHQ9HD43 1115 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 CENPAP49450 140 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
NEK4-201ENST00000233027 ALDH6A1Q02252 535 aaKnown RBP13.8□□□□□ -0.2
NEK4-201ENST00000233027 MPZL3Q6UWV2 235 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms