RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 MICAL2O94851 1124 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 RARGP13631 454 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 WARSP23381 471 aaKnown RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 RDXP35241 583 aaKnown RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 GNL1P36915 607 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 GGCXP38435 758 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ZNF143P52747 638 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 CDH8P55286 799 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 SLC8A3P57103 927 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 FAM189BP81408 668 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 HYAL1Q12794 435 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 CBLBQ13191 982 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ZNF211Q13398 564 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 GPM6BQ13491 265 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 COL19A1Q14993 1142 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ZNF394Q53GI3 561 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 TFDP3Q5H9I0 405 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 TJAP1Q5JTD0 557 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 DENND1BQ6P3S1 775 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ZNF598Q86UK7 904 aaKnown RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 XYLT1Q86Y38 959 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 RELL1Q8IUW5 271 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 MAP7D3Q8IWC1 876 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 LPPQ93052 612 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 C18orf25Q96B23 403 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 TBCBQ99426 244 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 FMO2Q99518 471 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 CNPY3Q9BT09 278 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 TMEM109Q9BVC6 243 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ROPN1BQ9BZX4 212 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 DCLK3Q9C098 648 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 SYNCQ9H7C4 482 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ROPN1Q9HAT0 212 aaPredicted RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 C11orf16Q9NQ32 467 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 ZDHHC18Q9NUE0 388 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
CDCA3-201ENST00000229265 WDFY4Q6ZS81 3184 aa11.19□□□□□ -0.62
CDCA3-201ENST00000229265 GOLGA6L10A6NI86 522 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 SRRM3A6NNA2 597 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 HMGB1P1B2RPK0 211 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 C5orf67F2Z3F1 127 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 DPYSL4O14531 572 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 DAPK3O43293 454 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 HUS1O60921 280 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RPS6KA5O75582 802 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RECQL4O94761 1208 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 ENDOD1O94919 500 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 GLP2RO95838 553 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 NUDT17P0C025 328 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 IGFBP6P24592 240 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 ECHS1P30084 290 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 CTNNB1P35222 781 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RFC1P35251 1148 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 BMPR1AP36894 532 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 LHX1P48742 406 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 ERVFC1P60507 584 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RPL7AP62424 266 aaKnown RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 CALCOCO2Q13137 446 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PTK6Q13882 451 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PDK2Q15119 407 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PTPN20Q4JDL3 420 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 TRMT10CQ7L0Y3 403 aaKnown RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PCGF5Q86SE9 256 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PSTKQ8IV42 348 aaKnown RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PASD1Q8IV76 773 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 CNPY4Q8N129 248 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 TMEM130Q8N3G9 435 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 ARFGAP2Q8N6H7 521 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 KLHL23Q8NBE8 558 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 APPL2Q8NEU8 664 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 SPPL3Q8TCT6 385 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 TEKT4Q8WW24 435 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RSPH1Q8WYR4 309 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 APBB2Q92870 758 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 BTBD6Q96KE9 485 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 ZMAT2Q96NC0 199 aaKnown RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 CASD1Q96PB1 797 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 VN1R3Q9BXE9 311 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 EIF2AQ9BY44 585 aaKnown RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 PHACTR1Q9C0D0 580 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
CDCA3-201ENST00000229265 NR2E1Q9Y466 385 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 IPPQ9Y573 584 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
CDCA3-201ENST00000229265 A8MXQ7 604 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 F8W810 466 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 GABRDO14764 452 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 ITGAVP06756 1048 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 THP07101 528 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 PSMA2P25787 234 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 MRPS5P82675 430 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 SLC6A3Q01959 620 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 PDCLQ13371 301 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 SKIV2LQ15477 1246 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms