RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 GALTP07902 379 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 COILP38432 576 aaPredicted RBP17.58■□□□□ 0.41
TVP23C-201ENST00000225576 CDKN2BP42772 138 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 SLC11A1P49279 550 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 TAZQ16635 292 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 BOLA3Q53S33 107 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 TFDP3Q5H9I0 405 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 SH3PXD2AQ5TCZ1 1133 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 CCDC137Q6PK04 289 aaKnown RBP17.58■□□□□ 0.41
TVP23C-201ENST00000225576 C4orf50Q6ZRC1 276 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 DCP1BQ8IZD4 617 aaKnown RBP17.58■□□□□ 0.41
TVP23C-201ENST00000225576 LRRC43Q8N309 656 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 SEC14L1Q92503 715 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 TMEM209Q96SK2 561 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 KCNK16Q96T55 309 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 HEMGNQ9BXL5 484 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 ZCWPW1Q9H0M4 648 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 PNPLA8Q9NP80 782 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 DMAP1Q9NPF5 467 aaPredicted RBP17.58■□□□□ 0.41
TVP23C-201ENST00000225576 TMEM30AQ9NV96 361 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 KLHL11Q9NVR0 708 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.58■□□□□ 0.41
TVP23C-201ENST00000225576 PCSK1NQ9UHG2 260 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 TSC2P49815 1807 aa17.58■□□□□ 0.41
TVP23C-201ENST00000225576 hCG_1818297A0A087WSY0 165 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 ABHD14A-ACY1A0A1B0GW23 586 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 KIAA0355O15063 1070 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 TTI1O43156 1089 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 PRPSAP2O60256 369 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 DAB1O75553 588 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SEC31AO94979 1220 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 TIMP1P01033 207 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 BDNFP23560 247 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 KDELR1P24390 212 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 MATKP42679 507 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 PTGIRP43119 386 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 CACNA2D1P54289 1103 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 YWHAZP63104 245 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 ATP11AP98196 1134 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 ELAVL2Q12926 359 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 MRPL58Q14197 206 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 LLGL1Q15334 1064 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 TTC27Q6P3X3 843 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.57■□□□□ 0.44e-6■■■□□ 19.2
TVP23C-201ENST00000225576 CYP4V2Q6ZWL3 525 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SCML4Q8N228 414 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SLCO2A1Q92959 643 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 TBCBQ99426 244 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 HINFPQ9BQA5 517 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 DCLK3Q9C098 648 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 RAB17Q9H0T7 212 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 MARCH5Q9NX47 278 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 UTP11Q9Y3A2 253 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 TET1Q8NFU7 2136 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SCN5AQ14524 2016 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 ENDOD1O94919 500 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 MYBL2P10244 700 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 FGFR3P22607 806 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 NDUFV1P49821 464 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 DAOAP59103 153 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 CUL1Q13616 776 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 CCNG2Q16589 344 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 CDO1Q16878 200 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SMTNL2Q2TAL5 461 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 KCNT1Q5JUK3 1230 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 VARS2Q5ST30 1063 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 STRADAQ7RTN6 431 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SPATA2LQ8IUW3 424 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 CASKIN2Q8WXE0 1202 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 PEBP4Q96S96 227 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 ULBP1Q9BZM6 244 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 PLEKHA4Q9H4M7 779 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 NGRNQ9NPE2 291 aaKnown RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 FEZ2Q9UHY8 353 aaPredicted RBP17.57■□□□□ 0.4
TVP23C-201ENST00000225576 RASAL2Q9UJF2 1139 aa17.57■□□□□ 0.4
TVP23C-201ENST00000225576 SF3B1O75533 1304 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■■■■ 111.2
TVP23C-201ENST00000225576 ZSCAN5CA6NGD5 496 aaPredicted RBP17.56■□□□□ 0.4
TVP23C-201ENST00000225576 DGKIO75912 1065 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 NOS2P35228 1153 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
TVP23C-201ENST00000225576 HDAC4P56524 1084 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 NFE2Q16621 373 aaPredicted RBP17.56■□□□□ 0.4
TVP23C-201ENST00000225576 SLC25A52Q3SY17 297 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 FAM171A1Q5VUB5 890 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 FUT10Q6P4F1 479 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 JAMLQ86YT9 394 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 CCDC105Q8IYK2 499 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 DEFB106AQ8N104 65 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 KCTD6Q8NC69 237 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 AENQ8WTP8 325 aaKnown RBP17.56■□□□□ 0.4
TVP23C-201ENST00000225576 C1orf54Q8WWF1 131 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 NT5C3BQ969T7 300 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 FAM149B1Q96BN6 582 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 ACSF2Q96CM8 615 aaPredicted RBP17.56■□□□□ 0.4
TVP23C-201ENST00000225576 SLC2A13Q96QE2 648 aa17.56■□□□□ 0.4
TVP23C-201ENST00000225576 RHOBTB2Q9BYZ6 727 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms