RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FDFT1P37268 417 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 TTC39BQ5VTQ0 682 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 ZNF410Q86VK4 478 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 PHACTR4Q8IZ21 702 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 USP13Q92995 863 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 OTUB1Q96FW1 271 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 SPASTQ9UBP0 616 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 SMG5Q9UPR3 1016 aaKnown RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 HES2Q9Y543 173 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 AGTP01019 485 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 PMS1P54277 932 aaKnown RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 SLC2A14Q8TDB8 520 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 OSGEPQ9NPF4 335 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 CDY2AQ9Y6F7 541 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 TISP43B9A030 160 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 SCAMP3O14828 347 aaKnown RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 RECQL4O94761 1208 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 ENO3P13929 434 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 SP100P23497 879 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 TBX4P57082 545 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 TIGD7Q6NT04 549 aaPredicted RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 NRBF2Q96F24 287 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 CNPY3Q9BT09 278 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 UBXN6Q9BZV1 441 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 TRIM16O95361 564 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 CCDC130P13994 396 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 NOGQ13253 232 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 TFDP3Q5H9I0 405 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 PDLIM2Q96JY6 352 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 NFKBIZQ9BYH8 718 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 CHCHD3Q9NX63 227 aaKnown RBP19.11■□□□□ 0.65
CLIP2-201ENST00000223398 PLAGL2Q9UPG8 496 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 BDNFP23560 247 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 PDK2Q15119 407 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 KIAA0895Q8NCT3 520 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 IL1RL2Q9HB29 575 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 OLFML3Q9NRN5 406 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 SCOCQ9UIL1 159 aa19.11■□□□□ 0.65
CLIP2-201ENST00000223398 ATP5HO75947 161 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 EEF1DP29692 281 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 MRNIPQ6NTE8 343 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 ELOA2Q8IYF1 753 aaPredicted RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 AAR2Q9Y312 384 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 GAKO14976 1311 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 NFASCO94856 1347 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 DEPDC5O75140 1603 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 KDM1AO60341 852 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 SMIM10L2AP0DMW4 78 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 SMIM10L2BP0DMW5 78 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 YWHAQP27348 245 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 ARHGEF19Q8IW93 802 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 SCUBE3Q8IX30 993 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 THG1LQ9NWX6 298 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 STIP1P31948 543 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 RFX3P48380 749 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 TTLL9Q3SXZ7 439 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 ZC3H12BQ5HYM0 836 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 TREML2Q5T2D2 321 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 STN1Q9H668 368 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 CCR1P32246 355 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 SFSWAPQ12872 951 aaKnown RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 MAP2K5Q13163 448 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 NIPA1Q7RTP0 329 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 MAGEB10Q96LZ2 347 aaPredicted RBP19.1■□□□□ 0.65
CLIP2-201ENST00000223398 ZNF518BQ9C0D4 1074 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 TRAF3IP3Q9Y228 551 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 HPSEQ9Y251 543 aa19.1■□□□□ 0.65
CLIP2-201ENST00000223398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 RAP1GDS1P52306 607 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 ABCE1P61221 599 aaKnown RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 HIST2H2ACQ16777 129 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 HIST2H2AA3Q6FI13 130 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 NT5DC3Q86UY8 548 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 TMEM121Q9BTD3 319 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 TMEM161AQ9NX61 479 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 TRIM49D1C9J1S8 452 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 ANKRD63C9JTQ0 380 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 CLASP2O75122 1294 aaKnown RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 C16orf59Q7L2K0 433 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 ZNF571Q7Z3V5 609 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 SPATA21Q7Z572 469 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 SMARCD1Q96GM5 515 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 IARS2Q9NSE4 1012 aaKnown RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 STARD3Q14849 445 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 PLCL1Q15111 1095 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 TEDDM1Q5T9Z0 273 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 LPCAT1Q8NF37 534 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 FBXO44Q9H4M3 255 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 SCHIP1Q9P0W5 487 aaPredicted RBP19.09■□□□□ 0.65
CLIP2-201ENST00000223398 DGKIO75912 1065 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 AXLP30530 894 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 NFIL3Q16649 462 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 CENPPQ6IPU0 288 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 UNC45BQ8IWX7 931 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 KIF20BQ96Q89 1820 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 SLC15A5A6NIM6 579 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 XYLBO75191 536 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 SPAG6O75602 509 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 MICAL2O94851 1124 aa19.09■□□□□ 0.65
CLIP2-201ENST00000223398 AMPD2Q01433 879 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms