RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PEBP4Q96S96 227 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 MIS12Q9H081 205 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 ALG13Q9NP73 1137 aaKnown RBP13.87□□□□□ -0.19
SRP54-201ENST00000216774 ARL8BQ9NVJ2 186 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 STOML1Q9UBI4 398 aa13.87□□□□□ -0.19
SRP54-201ENST00000216774 M0QYV0 167 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 TRDMT1O14717 391 aaKnown RBP13.86□□□□□ -0.19
SRP54-201ENST00000216774 GYG2O15488 501 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 GSC2O15499 205 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 LGR5O75473 907 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 KRT37O76014 449 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 NEFHP12036 1026 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 ACADSP16219 412 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 GPD1P21695 349 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 ATICP31939 592 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 ABL2P42684 1182 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 GPD2P43304 727 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 CDH6P55285 790 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 CAPRIN2Q6IMN6 1127 aaKnown RBP13.86□□□□□ -0.19
SRP54-201ENST00000216774 CCDC62Q6P9F0 684 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 CYP4V2Q6ZWL3 525 aaPredicted RBP13.86□□□□□ -0.19
SRP54-201ENST00000216774 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 ZC3H18Q86VM9 953 aaKnown RBP13.86□□□□□ -0.19
SRP54-201ENST00000216774 APOBEC3FQ8IUX4 373 aaKnown RBP13.86□□□□□ -0.19
SRP54-201ENST00000216774 TRIM42Q8IWZ5 723 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 LRRC71Q8N4P6 559 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 C1orf127Q8N9H9 656 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 TTC17Q96AE7 1141 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 ELOVL4Q9GZR5 314 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 IQCGQ9H095 443 aaKnown RBP13.86□□□□□ -0.19
SRP54-201ENST00000216774 SMYD3Q9H7B4 428 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 VRTNQ9H8Y1 702 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 USP29Q9HBJ7 922 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 TNFSF13BQ9Y275 285 aa13.86□□□□□ -0.19
SRP54-201ENST00000216774 SOWAHBA6NEL2 793 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 COPEO14579 308 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 ECM2O94769 699 aaPredicted RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 C1QAP02745 245 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 CXCL8P10145 99 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 VDRP11473 427 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 P4HA1P13674 534 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 BGNP21810 368 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 MAGEA6P43360 314 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 OSTNP61366 133 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 MMRN1Q13201 1228 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 LGSNQ5TDP6 509 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 ANGEL2Q5VTE6 544 aaKnown RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 NPNTQ6UXI9 565 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 LBX2Q6XYB7 198 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 RIOX2Q8IUF8 465 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 MAP7D3Q8IWC1 876 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 LMNTD2Q8IXW0 634 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 RNF157Q96PX1 679 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 TWNKQ96RR1 684 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 SRPK1Q96SB4 655 aaKnown RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 CDT1Q9H211 546 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 MKS1Q9NXB0 559 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 HMGXB4Q9UGU5 601 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 TTLL3Q9Y4R7 772 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 ANK1P16157 1881 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 C2CD4BA6NLJ0 364 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 H7C0C1 242 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 INO80B-WBP1J3KQ70 363 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 PRPSAP2O60256 369 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 GSTA2P09210 222 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 PRKCHP24723 683 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 ATP5OP48047 213 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 NRLP54845 237 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 YWHAZP63104 245 aaKnown RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 PDK2Q15119 407 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 TMEM132AQ24JP5 1023 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 EEF1DP3Q658K8 133 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 CEP120Q8N960 986 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 SPDL1Q96EA4 605 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 OXNAD1Q96HP4 312 aaPredicted RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 GPR20Q99678 358 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 INO80BQ9C086 356 aaPredicted RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 FAM124BQ9H5Z6 455 aaPredicted RBP13.85□□□□□ -0.19
SRP54-201ENST00000216774 RAB6BQ9NRW1 208 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
SRP54-201ENST00000216774 A6NHS1 94 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 H0Y3Z8 333 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 B4GALT5O43286 388 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 NFICP08651 508 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 TGM2P21980 687 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 ORC1Q13415 861 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 KHDC1Q4VXA5 237 aaKnown RBP13.84□□□□□ -0.19
SRP54-201ENST00000216774 RFWD3Q6PCD5 774 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 C4orf22Q6V702 233 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 CXorf38Q8TB03 319 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 DNAJC9Q8WXX5 260 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 USP6NLQ92738 828 aa13.84□□□□□ -0.19
SRP54-201ENST00000216774 MCUR1Q96AQ8 359 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms