RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TAS1R2Q8TE23 839 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 LACRTQ9GZZ8 138 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 CDC42EP4Q9H3Q1 356 aaKnown RBP14.02□□□□□ -0.17
SF3A1-201ENST00000215793 NDUFA13Q9P0J0 144 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 ABCA6Q8N139 1617 aa14.02□□□□□ -0.17
SF3A1-201ENST00000215793 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 AKAP3O75969 853 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CCDC159P0C7I6 412 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 IMPDH2P12268 514 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 GTF2A2P52657 109 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 RPL10AP62906 217 aaKnown RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CYP24A1Q07973 514 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 ARMC6Q6NXE6 501 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 TXNRD3Q86VQ6 643 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 USP18Q9UMW8 372 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CYB561D2O14569 222 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 RANBP1P43487 201 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 GCLCP48506 637 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 SEL1L3Q68CR1 1132 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 C11orf63Q6NUN7 778 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 ERO1BQ86YB8 467 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 APLFQ8IW19 511 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 BTN2A2Q8WVV5 523 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 FBXO32Q969P5 355 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 VPS50Q96JG6 964 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PAFAH2Q99487 392 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 YIPF2Q9BWQ6 316 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 RIOX1Q9H6W3 641 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CISHQ9NSE2 258 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DLGAP2Q9P1A6 1054 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 AP4E1Q9UPM8 1137 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 ACOT9Q9Y305 439 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 A0A1B0GW55 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 GUCA1CO95843 209 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4L2P0CJ85 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4L3P0CJ86 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4L4P0CJ87 422 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4L5P0CJ88 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4L6P0CJ89 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4L7P0CJ90 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 MAPTP10636 758 aaKnown RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DPEP1P16444 411 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PSMA3P25788 255 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 THPOP40225 353 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PTPN11Q06124 597 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CYB5D1Q6P9G0 228 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PRMT6Q96LA8 375 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 RMND5AQ9H871 391 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CAAP1Q9H8G2 361 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CHST12Q9NRB3 414 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 NCKIPSDQ9NZQ3 722 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 DUX4Q9UBX2 424 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PRR23D1E9PI22 279 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 USP1O94782 785 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PRR23D2P0DMB1 279 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 LHX1P48742 406 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 NUP107P57740 925 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 IRX1P78414 480 aaPredicted RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 CHRNB3Q05901 458 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 EIF2B5Q13144 721 aaKnown RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 AMHR2Q16671 573 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 MIB1Q86YT6 1006 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 ADGRF2Q8IZF7 708 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 MRPS31Q92665 395 aaKnown RBP14.01□□□□□ -0.17
SF3A1-201ENST00000215793 ZFP42Q96MM3 310 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 PACSIN1Q9BY11 444 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 UBXN6Q9BZV1 441 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 RAD54BQ9Y620 910 aa14.01□□□□□ -0.17
SF3A1-201ENST00000215793 XPO1O14980 1071 aaKnown RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 NFIAQ12857 509 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 CNTN1Q12860 1018 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 ADRM1Q16186 407 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 SV2AQ7L0J3 742 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 TMEM176AQ96HP8 235 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 RUVBL2Q9Y230 463 aaKnown RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 CDC42BPAQ5VT25 1732 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 MAGEA13PA6NCF6 341 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 MLNP12872 115 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 DSG1Q02413 1049 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 UBE3AQ05086 875 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 NFE2Q16621 373 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 ZNF571Q7Z3V5 609 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 DDI1Q8WTU0 396 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 L3MBTL3Q96JM7 780 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 ARHGAP20Q9P2F6 1191 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 SNTNA6NMZ2 147 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 TM9SF1O15321 606 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 TPST1O60507 370 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 CRTAMO95727 393 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 UBTFL6P0CB48 400 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 NQO1P15559 274 aaKnown RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 ITGALP20701 1170 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 KLRK1P26718 216 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 PEX5P50542 639 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 FCGRTP55899 365 aa14□□□□□ -0.17
SF3A1-201ENST00000215793 CCDC60Q8IWA6 550 aaPredicted RBP14□□□□□ -0.17
SF3A1-201ENST00000215793 UCMAQ8WVF2 138 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms