RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FAXCQ5TGI0 409 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 ANKRD20A1Q5TYW2 823 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 ANKRD20A3Q5VUR7 823 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 PPP1R21Q6ZMI0 780 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 CCDC125Q86Z20 511 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 NIPA2Q8N8Q9 360 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 CPT1BQ92523 772 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 ZMAT2Q96NC0 199 aaKnown RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 LRRC37BQ96QE4 947 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 EIF2AQ9BY44 585 aaKnown RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 AVILO75366 819 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 UNC5CO95185 931 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 SNAI1O95863 264 aaPredicted RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 ITGAVP06756 1048 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 SMPD1P17405 629 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 EPHB2P29323 1055 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 GOLGA7BQ2TAP0 167 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 ZC3H12AQ5D1E8 599 aaKnown RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 CENPUQ71F23 418 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 ASRGL1Q7L266 308 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 LRRC8CQ8TDW0 803 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 NKD2Q969F2 451 aaPredicted RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 MAK16Q9BXY0 300 aaKnown RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 NPHS2Q9NP85 383 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 TUBGCP4Q9UGJ1 667 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 DRG1Q9Y295 367 aaKnown RBP13.72□□□□□ -0.21
CTNS-201ENST00000046640 PPME1Q9Y570 386 aa13.72□□□□□ -0.21
CTNS-201ENST00000046640 BTBD19C9JJ37 291 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 ADCY6O43306 1168 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 GPX6P59796 221 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 ZNF792Q3KQV3 632 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 PPP6R3Q5H9R7 873 aaPredicted RBP13.71□□□□□ -0.21
CTNS-201ENST00000046640 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 PMF1Q6P1K2 205 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 DARS2Q6PI48 645 aaKnown RBP13.71□□□□□ -0.21
CTNS-201ENST00000046640 LONP2Q86WA8 852 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 NETO2Q8NC67 525 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 TTC8Q8TAM2 541 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 SMC6Q96SB8 1091 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 OSMRQ99650 979 aa13.71□□□□□ -0.21
CTNS-201ENST00000046640 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.21
CTNS-201ENST00000046640 TMEM63AO94886 807 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 TRUB2O95900 331 aaKnown RBP13.71□□□□□ -0.22
CTNS-201ENST00000046640 PDHA1P08559 390 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 TFE3P19532 575 aaPredicted RBP13.71□□□□□ -0.22
CTNS-201ENST00000046640 ATXN1P54253 815 aaKnown RBP13.71□□□□□ -0.22
CTNS-201ENST00000046640 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.22
CTNS-201ENST00000046640 TNFAIP2Q03169 654 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 MORF4L2Q15014 288 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 C3orf62Q6ZUJ4 267 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 TRABD2AQ86V40 505 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 CCHCR1Q8TD31 782 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 MAML1Q92585 1016 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.22
CTNS-201ENST00000046640 LOC285556D6RIA3 1793 aa13.71□□□□□ -0.22
CTNS-201ENST00000046640 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 F5H423 210 aaPredicted RBP13.7□□□□□ -0.22
CTNS-201ENST00000046640 H7C0C1 242 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 FGFR1P11362 822 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 VDRP11473 427 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 ATP5OP48047 213 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 RBP5P82980 135 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 SATB1Q01826 763 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 CCL15Q16663 113 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 DRICH1Q6PGQ1 229 aaPredicted RBP13.7□□□□□ -0.22
CTNS-201ENST00000046640 LVRNQ6Q4G3 990 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 BBS12Q6ZW61 710 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 FBXO36Q8NEA4 188 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 OR6B3Q8NGW1 331 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 CLEC4CQ8WTT0 213 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 DPEP3Q9H4B8 488 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 ASB7Q9H672 318 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 UBN1Q9NPG3 1134 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 XPO7Q9UIA9 1087 aaKnown RBP13.7□□□□□ -0.22
CTNS-201ENST00000046640 CHMP2BQ9UQN3 213 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 MAGEB2O15479 319 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 DYNC1LI2O43237 492 aaPredicted RBP13.7□□□□□ -0.22
CTNS-201ENST00000046640 ASMTLO95671 621 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 P4HA1P13674 534 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 KRT4P19013 534 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 SEPT7Q16181 437 aaKnown RBP13.7□□□□□ -0.22
CTNS-201ENST00000046640 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 POLNQ7Z5Q5 900 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 NME7Q9Y5B8 376 aa13.7□□□□□ -0.22
CTNS-201ENST00000046640 ENTPD5O75356 428 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 PFKMP08237 780 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ALADP13716 330 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 GPD1P21695 349 aa13.69□□□□□ -0.22
CTNS-201ENST00000046640 ADORA2BP29275 332 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms