RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Polr3cQ9D483 533 aa16.28■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Stk11Q9WTK7 436 aa16.28■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Hao1Q9WU19 370 aa16.28■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Cib2Q9Z309 187 aa16.28■□□□□ 0.2
Sdc1-205ENSMUST00000171158 1700031M16RikA0A087WSH0 82 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Olfr391-psA0A0U1RNJ4 312 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Top6blJ3QMY9 579 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Edil3O35474 480 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Dnase1l3O55070 310 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Gjb3P28231 270 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Rab6bP61294 208 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 YwhagP61982 247 aaKnown RBP16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 YwhazP63101 245 aaKnown RBP16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Kcnq1P97414 668 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Olfm4Q3UZZ4 505 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Trim38Q5SZ99 471 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 PrkciQ62074 595 aaKnown RBP16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 SowahaQ8BLS7 548 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Kct2Q8K201 259 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Ddx1Q91VR5 740 aaKnown RBP16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 TfQ921I1 697 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Ctu1Q99J10 420 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Pcyox1Q9CQF9 505 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Tspan17Q9D7W4 270 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Tex9Q9D845 387 aa16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 PollQ9QXE2 573 aaKnown RBP16.27■□□□□ 0.2
Sdc1-205ENSMUST00000171158 Ank3G5E8K5 1961 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Ankfn1A0A140LIW7 1083 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Vmn2r84D3YWE3 849 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Vmn2r104E9Q2J5 860 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Npas2P97460 816 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 GclcP97494 637 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Gspt2Q149F3 632 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Sh3rf1Q69ZI1 892 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Gemin4Q6P6L6 1058 aaKnown RBP16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Arhgap15Q811M1 481 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Pi4kbQ8BKC8 816 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Sec63Q8VHE0 760 aaKnown RBP16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Pgm1Q9D0F9 562 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Bace2Q9JL18 514 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 TfgQ9Z1A1 397 aa16.27■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Tnfrsf14A0A1W2P7D5 276 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 InhbaQ04998 424 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Fam172aQ3TNH5 417 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Mif4gdQ3UBZ5 222 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Xkr4Q5GH67 647 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Pabpn1lQ5XFR0 273 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Spata24Q6P926 205 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Prr18Q6PAN7 307 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Tspan18Q80WR1 248 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Lrrc19Q8BZT5 364 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Tasp1Q8R1G1 420 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Zcchc18Q8VD24 393 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Bag2Q91YN9 210 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Mms19Q9D071 1031 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Gstt4Q9D4P7 240 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Copg2Q9QXK3 871 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Zfp236S4R299 1847 aa16.26■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Gm29133A0A1B0GT72 266 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Farp1F8VPU2 1048 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Eef1bO70251 225 aaKnown RBP16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Oaz1P54369 227 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Papss1Q60967 624 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Cln3Q61124 438 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Adgre1Q61549 931 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Tcaf3Q6QR59 914 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Stambpl1Q76N33 436 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Q810S2 196 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Slc15a5Q8CBB2 566 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Olfr393Q8VGR6 312 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Pcdhb6Q91XZ4 772 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Fam3aQ9D8T0 230 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Subh2bvQ9D9Z7 123 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Magel2Q9QZ04 1284 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Trpv2Q9WTR1 756 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Crlf3Q9Z2L7 442 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Krt27Q9Z320 448 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Efcab12V9GXH0 673 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Gm11985A0A1B0GS61 206 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Fam171a2A2A699 822 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 B020004C17RikJ3QP07 232 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Pias1O88907 651 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Soat2O88908 525 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Gstt2Q61133 244 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Phactr3Q8BYK5 558 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Dnajc9Q91WN1 259 aaKnown RBP16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 YarsQ91WQ3 528 aaKnown RBP16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Fam49bQ921M7 324 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Ubxn11Q9D572 484 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Mrps9Q9D7N3 390 aaKnown RBP16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Tnfrsf10bQ9QZM4 381 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 S1pr4Q9Z0L1 386 aa16.25■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Slc4a11A2AJN7 862 aa16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Vmn2r87E9PZX4 848 aa16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Pdcd2P46718 343 aa16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 PfkmP47857 780 aaKnown RBP16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Msx3P70354 204 aa16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Oas1fQ14AZ4 364 aa16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Faf2Q3TDN2 445 aa16.24■□□□□ 0.19
Sdc1-205ENSMUST00000171158 Tmem65Q4VAE3 234 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms