RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Iqsec1Q8R0S2 961 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Rxfp2Q91ZZ5 737 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 SelenosQ9BCZ4 190 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Anxa9Q9JHQ0 345 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cnga3Q9JJZ8 631 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Xpr1Q9Z0U0 695 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Foxn1Q61575 648 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tspyl5Q69ZB3 406 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Eif3mQ99JX4 374 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Pus3Q9JI38 481 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ism1A2ATD1 454 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Foxp2P58463 714 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 PighQ5M9N4 188 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Lrrc24Q8BHA1 521 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Psmd5Q8BJY1 504 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 MtrexQ9CZU3 1040 aaKnown RBP17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Nek7Q9ES74 302 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 HnrnpdlQ9Z130 301 aaKnown RBP17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Lrriq1Q0P5X1 1673 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Anxa8O35640 327 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ddx3yQ62095 658 aaKnown RBP17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 ChpfQ6IQX7 774 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Pcdhb6Q91XZ4 772 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ndufaf1Q9CWX2 328 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Wdr12Q9JJA4 423 aa17.1■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Usp42B2RQC2 1324 aaKnown RBP17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Atpif1O35143 106 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 PcnaP17918 261 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Alox12P39655 663 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Esyt3Q5DTI8 891 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 FsbpQ8BKE5 299 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cep95Q8BVV7 827 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 TbceQ8CIV8 524 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Pde8bE9Q4S1 865 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 2610008E11RikG3X964 669 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ets2P15037 468 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ptprn2P80560 1001 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Klra7Q60654 280 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tcf4Q60722 670 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 NfkbibQ60778 359 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Usf2Q64705 346 aaKnown RBP17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Sycp2Q9CUU3 1500 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Atf6F6VAN0 656 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cyp2d10P24456 504 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ccnd1P25322 295 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Trim43bP86448 445 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Dsg1bQ7TSF1 1060 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Hist1h2aaQ8CGP4 129 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Epn2Q8CHU3 595 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Kiaa0391Q8JZY4 584 aaKnown RBP17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Aldh9a1Q9JLJ2 494 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 KdsrQ6GV12 332 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tas2r109Q7M707 316 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 RnpepQ8VCT3 650 aaKnown RBP17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Pprc1Q6NZN1 1644 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gm7168A0AUV4 508 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ttll8A4Q9F1 832 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Slc4a5E9Q3M5 1116 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ess2O70279 479 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ftsj1Q8CBC7 324 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Mgrn1Q9D074 532 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Fam84aQ9D650 292 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Tmem138Q9D6G5 162 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Gm13941A2AJ38 245 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Clip3B9EHT4 547 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Spin2fJ3QPU0 254 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 ApoeP08226 311 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 CblP22682 913 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Agap1Q8BXK8 857 aaKnown RBP17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Saysd1Q8K190 188 aa17.09■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Pabpc1lA2A5N3 607 aaKnown RBP17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 CercamA3KGW5 592 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Q6DFW0 481 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Zbtb6Q8K088 423 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cox18Q8VC74 331 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Cdk20Q9JHU3 346 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 CtsfQ9R013 462 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Zfy2P20662 777 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 UcmaQ14BU0 138 aa17.08■□□□□ 0.33
Ubr3-202ENSMUST00000112251 Ap1s1P61967 158 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Msx3P70354 204 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Adora2bQ60614 332 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ints2Q80UK8 1198 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Pdk1Q8BFP9 434 aaKnown RBP17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 RorbQ8R1B8 470 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 D6Wsu163eQ91YN0 552 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 GOLGA7BQ9D428 167 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Smim22J3QP37 91 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Kcnj6P48542 425 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ncf4P97369 339 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Ptchd3Q0EEE2 906 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Dlg1Q811D0 905 aaKnown RBP17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Dctn2Q99KJ8 402 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nck1Q99M51 377 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Shroom2A2ALU4 1481 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Myom2Q14BI5 1463 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Lcn6A2AJB9 181 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 DbiP31786 87 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Tm6sf1P58749 370 aa17.08■□□□□ 0.32
Ubr3-202ENSMUST00000112251 Nlrc4Q3UP24 1024 aa17.08■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms