RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Atp11bQ6DFW5 1175 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Samd4aQ8CBY1 711 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tmem132cQ8CEF9 1099 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Slc47a1Q8K0H1 567 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Spire2Q8K1S6 718 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Taf12Q8VE65 161 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Apobec3Q99J72 440 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Josd2Q9CR30 188 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Zfp655Q9CZP3 541 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tssk3Q9D2E1 268 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 4930513O06RikQ9D549 161 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Spesp1Q9D5A0 399 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tgm5Q9D7I9 724 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Gprc5dQ9JIL6 344 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Psma4Q9R1P0 261 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Ror1Q9Z139 937 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Igsf9bE9PZ19 1328 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Smok3cA0A087WSF2 504 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Pabpc1lA2A5N3 607 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 CtcflA2APF3 636 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Ces1cP23953 554 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Marcksl1P28667 200 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 RxraP28700 467 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Rbp3P49194 1234 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Inpp1P49442 396 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Slc16a1P53986 493 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Btbd3P58545 530 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Nrp1P97333 923 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Gpr162Q3UN16 588 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Fam129aQ3UW53 926 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Gdpd5Q640M6 607 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Gemin4Q6P6L6 1058 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Glis3Q6XP49 780 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tdpoz2Q717B2 364 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Pdzph1Q8BGR1 1238 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tyw1Q8BJM7 721 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Eme1Q8BJW7 570 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Ppme1Q8BVQ5 386 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Snx16Q8C080 344 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Pnma1Q8C1C8 353 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Mrgprx1Q8CIP3 322 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Cd300ldQ8VCH2 221 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 TgdsQ8VDR7 355 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Slc12a6Q924N4 1150 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Trim33Q99PP7 1142 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Rprd1bQ9CSU0 326 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tomm70Q9CZW5 611 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Lrrc57Q9D1G5 239 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Cdkl2Q9QUK0 568 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Eya4Q9Z191 616 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Arid3bQ9Z1N7 568 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Spef2Q8C9J3 1734 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 AspgA0JNU3 564 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Frmd7A2AD83 703 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Olfr1145A2AVC7 325 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Smok3aC0HKC8 504 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Smok3bC0HKC9 504 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Usp17ldG5E8G2 545 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Usp17lcG5E8I7 545 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Gm3248K7N721 186 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Rpl21O09167 160 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 P01734 135 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 IppP28575 584 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Pbx1P41778 430 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Atp6v1e1P50518 226 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Tigd5Q499M4 642 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 2900092C05RikQ5I0V9 184 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Fbxo39Q5NBU5 443 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Lcn3Q62471 182 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Sv2cQ69ZS6 727 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Edrf1Q6GQV7 1239 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Gpr101Q80T62 511 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Usp6nlQ80XC3 819 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Psd4Q8BLR5 1005 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 RorbQ8R1B8 470 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Olfr1361Q8VFH0 317 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Hdhd5Q91WM2 419 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Far1Q922J9 515 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Stk33Q924X7 491 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Hsd3b7Q9EQC1 369 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 DiabloQ9JIQ3 237 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Kif13aQ9EQW7 1749 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Unc13dB2RUP2 1085 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Clrn2B2RVW2 232 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Zbtb11G5E8B9 1050 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Adam7O35227 789 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Mcpt4P21812 246 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Snai1Q02085 264 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Clec12aQ504P2 267 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Myo19Q5SV80 963 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Noc4lQ8BHY2 516 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Mrps35Q8BJZ4 320 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Pum3Q8BKS9 647 aaKnown RBP7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Arhgap25Q8BYW1 648 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Sept10Q8C650 452 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Rnf219Q8K2Y0 722 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Smyd2Q8R5A0 433 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Plekha4Q8VC98 588 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Oxnad1Q8VE38 311 aa7.3□□□□□ -1.24
Smc1a-201ENSMUST00000045312 Nrbp2Q91V36 499 aa7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms