RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Teddm1aQ810U2 305 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Slc47a1Q8K0H1 567 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Dnajc9Q91WN1 259 aaKnown RBP17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mtif2Q91YJ5 727 aaKnown RBP17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pdap1Q3UHX2 181 aaKnown RBP17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cyp4x1Q6A152 507 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Nemp2Q8CB65 421 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Leng8Q8CBY3 785 aaKnown RBP17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Myo1hQ9D6A1 958 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pnldc1B2RXZ1 531 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Vmn2r7E9PYL5 915 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Vmn2r3H3BJ88 915 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Vmn2r6H3BK29 913 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Aldh3b1Q80VQ0 468 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pcsk9Q80W65 694 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gpatch1Q9DBM1 930 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Esyt3Q5DTI8 891 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 RgmbQ7TQ33 436 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gtf2h3Q8VD76 309 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Klhl35Q9CZ49 574 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cd86P42082 309 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmco6Q8BQX5 494 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Agap1Q8BXK8 857 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ttc16Q8C1F5 767 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tada2aQ8CHV6 443 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pitpnm2Q6ZPQ6 1335 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Erich1E9PY43 332 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmem35bQ3U0Y2 150 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 MregQ6NVG5 214 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Fgd2Q8BY35 655 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tesk2Q8VCT9 570 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Olfr397Q8VEZ6 315 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rpap3Q9D706 660 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tssc4Q9JHE7 317 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pcna-ps2A0A140T8V5 261 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Phactr1Q2M3X8 580 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Brd8Q8R3B7 951 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Plekhg6Q8R0J1 787 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Nxnl1Q8VC33 217 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cdr2lA2A6T1 465 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cdh16O88338 830 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Itga1Q3V3R4 1179 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Sun2Q8BJS4 731 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ercc4Q9QZD4 917 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Dip2aQ8BWT5 1523 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 InaP46660 501 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 PkmP52480 531 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Erbb2P70424 1256 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 HelqQ2VPA6 1069 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Abcg2Q7TMS5 657 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 AfdnQ9QZQ1 1820 aaKnown RBP17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gm5072A2AHM1 344 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ifi213D3Z5G0 586 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Epb41l5Q8BGS1 731 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Dennd2aQ8C4S8 1000 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 EvplQ9D952 2035 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Oas1eA0A0J9YV76 386 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rad21l1A2AU37 552 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Olfr292F8VQ84 308 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 PdynO35417 248 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Scd1P13516 355 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 GemP55041 295 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rad51Q08297 339 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gpr141Q7TQP0 305 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Teddm1bQ8CC62 306 aa17.1■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Kansl3A2RSY1 903 aaKnown RBP17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ube3cQ80U95 1083 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Prmt7Q922X9 692 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Zcchc11B2RX14 1644 aaKnown RBP17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rhox3cA2AWM0 215 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rhox3hL7MU37 215 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Reps1O54916 795 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rhox3aQ4TU90 215 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Atg14Q8CDJ3 492 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Oscp1Q8BHW2 379 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Anapc2Q8BZQ7 837 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pcyox1Q9CQF9 505 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Zmym5Q3U2E2 627 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Slc20a2Q80UP8 656 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Zbtb8bQ8CII0 484 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Reep2Q8VCD6 254 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Efhd2Q9D8Y0 240 aaKnown RBP17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Skp1Q9WTX5 163 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Large1Q9Z1M7 756 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Htr3aP23979 487 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Q5EBG8 199 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cnot7Q60809 285 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Soat1Q61263 540 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pcdhb1Q91Y08 818 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tube1Q9D6T1 475 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmem79Q9D709 391 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Vmn2r4K7N784 913 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cdca2Q14B71 982 aaKnown RBP17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cyp3a11Q64459 504 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mapre3Q6PER3 281 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Yipf1Q91VU1 306 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mtmr4Q91XS1 1190 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Myo10F8VQB6 2062 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ttc37F8VPK0 1563 aa17.09■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Adam7O35227 789 aa17.09■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms