RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ddx17Q501J6 650 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 ChfrQ810L3 664 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gpc3Q8CFZ4 579 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 NclnQ8VCM8 563 aaKnown RBP10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 CenpkQ9ESN5 271 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 FancfE9Q5Z5 343 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zcchc2Q69ZB8 1166 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pi4kbQ8BKC8 816 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Atp6v1g3Q8BMC1 118 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Wwp1Q8BZZ3 918 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Phc3Q8CHP6 981 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Wdr64Q9D565 1086 aa10.48□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pnpla6Q3TRM4 1355 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Krt83E9Q1Y9 479 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 2210016F16RikG3X8U3 338 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rrm2P11157 390 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm5431Q5NCB3 844 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sema5aQ62217 1077 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Klra3Q64329 266 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gpr141Q7TQP0 305 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Teddm1aQ810U2 305 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Chtf18Q8BIW9 969 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Sulf1Q8K007 870 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Unc45aQ99KD5 944 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 OoepQ9CWE6 164 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 MajinQ9D992 256 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Trpc7Q9WVC5 862 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Twf2Q9Z0P5 349 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Abca6Q8K441 1624 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zscan4-ps1A0A1C7CYV3 506 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rad21l1A2AU37 552 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zscan4dA7KBS4 506 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tnk2O54967 1055 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PrkcbP68404 671 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ppp4cP97470 307 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 AcadsQ07417 412 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tekt4Q149S1 447 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cyp2j11Q3UNV2 504 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zscan4fQ3URS2 506 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Dpysl3Q62188 570 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zscan4cQ80VJ6 506 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tyw1Q8BJM7 721 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 RorbQ8R1B8 470 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 AspgA0JNU3 564 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zc3h7aE9PWW6 970 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 RxrgP28705 463 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mmp13P33435 472 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rpl10aP53026 217 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Itih2Q61703 946 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Magee1Q6PCZ4 918 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zfp398Q8BV16 643 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Phka2Q8BWJ3 1235 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Washc5Q8C2E7 1159 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Smtnl2Q8CI12 456 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 BsndQ8VIM4 307 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Oas1cQ924S2 362 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Trim13Q9CYB0 407 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ola1Q9CZ30 396 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Setd1bQ8CFT2 1985 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr600E9PUN7 314 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 PtproE9Q612 1226 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ak8Q32M07 479 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zbtb39Q6PDK0 712 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr1415Q7TQS4 311 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Frmd4aQ8BIE6 1020 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Olfr1416Q8VGU4 312 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tmem39aQ9CYC3 486 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Zfp655Q9CZP3 541 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Fam171a1A2ATK9 892 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Drg1P32233 367 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mcm9Q2KHI9 1134 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Glt6d1Q2NKH9 311 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tmem26Q3UP23 366 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Esyt3Q5DTI8 891 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gpr180Q8BPS4 441 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rasal3Q8C2K5 1041 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rxfp2Q91ZZ5 737 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm5478D3Z6R0 159 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cyp2j6O54750 501 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Vti1bO88384 232 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 H2-Eb1P04230 264 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Hoxc10P31257 342 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Elac2Q80Y81 831 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tmc7Q8C428 726 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Dis3Q9CSH3 958 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Polr3hQ9D2C6 204 aaKnown RBP10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tmod3Q9JHJ0 352 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Rps6ka4Q9Z2B9 773 aa10.47□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Elk3P41971 409 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 NcstnP57716 708 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gpd1lQ3ULJ0 351 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 4933427I04RikQ3V053 235 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Klra6Q60653 266 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pex26Q8BGI5 305 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pgs1Q8BHF7 553 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Arhgef10Q8C033 1345 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 AurkbO70126 345 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tap1P21958 724 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Znf112Q0VAW7 879 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 ThrspQ62264 150 aa10.46□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms