RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A SAE3P89114 91 aa10.7□□□□□ -0.7
TRN1tP(UGG)A YDL085C-AQ3E7B7 68 aaKnown RBP10.7□□□□□ -0.7
TRN1tP(UGG)A HAP3P13434 144 aa10.68□□□□□ -0.7
TRN1tP(UGG)A UGX2P32772 223 aa10.67□□□□□ -0.7
TRN1tP(UGG)A OXA1P39952 402 aa10.67□□□□□ -0.7
TRN1tP(UGG)A YFR057WP43625 151 aa10.67□□□□□ -0.7
TRN1tP(UGG)A PAU23Q07987 124 aa10.67□□□□□ -0.7
TRN1tP(UGG)A PAU17Q12370 124 aa10.67□□□□□ -0.7
TRN1tP(UGG)A AQY2P0CD90 149 aa10.65□□□□□ -0.7
TRN1tP(UGG)A CDC43P18898 376 aa10.65□□□□□ -0.7
TRN1tP(UGG)A CWP2P43497 92 aa10.64□□□□□ -0.71
TRN1tP(UGG)A SMD1Q02260 146 aaPredicted RBP10.64□□□□□ -0.71
TRN1tP(UGG)A ABF2Q02486 183 aa10.62□□□□□ -0.71
TRN1tP(UGG)A YLL006W-AQ3E814 58 aa10.61□□□□□ -0.71
TRN1tP(UGG)A MID2P36027 376 aa10.6□□□□□ -0.71
TRN1tP(UGG)A SMP1P38128 452 aa10.6□□□□□ -0.71
TRN1tP(UGG)A MVB12P42939 101 aa10.59□□□□□ -0.71
TRN1tP(UGG)A ELC1Q03071 99 aa10.59□□□□□ -0.71
TRN1tP(UGG)A MBF1O14467 151 aaKnown RBP10.57□□□□□ -0.72
TRN1tP(UGG)A YML079WQ03629 201 aa10.57□□□□□ -0.72
TRN1tP(UGG)A YLR363W-AQ3E747 85 aa10.56□□□□□ -0.72
TRN1tP(UGG)A PEX22P39718 180 aa10.55□□□□□ -0.72
TRN1tP(UGG)A YFL019CP43576 117 aa10.55□□□□□ -0.72
TRN1tP(UGG)A UBC11P52492 156 aa10.55□□□□□ -0.72
TRN1tP(UGG)A YBL039W-BP0C268 59 aa10.53□□□□□ -0.72
TRN1tP(UGG)A GLC8P41818 229 aa10.52□□□□□ -0.73
TRN1tP(UGG)A YGL041C-BQ3E750 60 aa10.52□□□□□ -0.73
TRN1tP(UGG)A ECM12O13529 151 aa10.51□□□□□ -0.73
TRN1tP(UGG)A GIS2P53849 153 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
TRN1tP(UGG)A Q0032Q9ZZX7 96 aa10.5□□□□□ -0.73
TRN1tP(UGG)A HPA2Q06592 156 aa10.49□□□□□ -0.73
TRN1tP(UGG)A STF1P01098 86 aa10.48□□□□□ -0.73
TRN1tP(UGG)A YIA6P40556 373 aa10.48□□□□□ -0.73
TRN1tP(UGG)A IGD1P43598 195 aa10.46□□□□□ -0.73
TRN1tP(UGG)A CWC27Q02770 301 aa10.46□□□□□ -0.73
TRN1tP(UGG)A RPL29P05747 59 aaPredicted RBP10.45□□□□□ -0.74
TRN1tP(UGG)A YLR307C-AQ3E825 87 aa10.45□□□□□ -0.74
TRN1tP(UGG)A YOR020W-AQ3E824 90 aa10.44□□□□□ -0.74
TRN1tP(UGG)A YER181CP40097 107 aa10.43□□□□□ -0.74
TRN1tP(UGG)A AIM19P40502 157 aa10.43□□□□□ -0.74
TRN1tP(UGG)A PAI3P01094 68 aa10.42□□□□□ -0.74
TRN1tP(UGG)A RGM1Q00453 211 aa10.42□□□□□ -0.74
TRN1tP(UGG)A ARO2P28777 376 aaKnown RBP10.41□□□□□ -0.74
TRN1tP(UGG)A EOS1P53938 366 aa10.41□□□□□ -0.74
TRN1tP(UGG)A KNH1P50112 268 aa10.4□□□□□ -0.74
TRN1tP(UGG)A YHR130CP38834 111 aa10.39□□□□□ -0.75
TRN1tP(UGG)A LCL1Q02786 101 aa10.39□□□□□ -0.75
TRN1tP(UGG)A LSO2Q3E772 92 aaKnown RBP10.39□□□□□ -0.75
TRN1tP(UGG)A COX10P21592 462 aa10.36□□□□□ -0.75
TRN1tP(UGG)A YKL023C-AQ2V2P3 75 aa10.36□□□□□ -0.75
TRN1tP(UGG)A UBC4P15731 148 aa10.35□□□□□ -0.75
TRN1tP(UGG)A YLR296WQ05898 108 aa10.35□□□□□ -0.75
TRN1tP(UGG)A YNL162W-AQ3E7A8 72 aa10.35□□□□□ -0.75
TRN1tP(UGG)A CPR1P14832 162 aaKnown RBP10.34□□□□□ -0.75
TRN1tP(UGG)A IRC21Q04772 201 aa10.34□□□□□ -0.75
TRN1tP(UGG)A NHP2P32495 156 aaPredicted RBP10.33□□□□□ -0.76
TRN1tP(UGG)A LSM6Q06406 86 aaKnown RBP10.32□□□□□ -0.76
TRN1tP(UGG)A POP7P38291 140 aa10.31□□□□□ -0.76
TRN1tP(UGG)A YGL193CP53097 103 aa10.31□□□□□ -0.76
TRN1tP(UGG)A MMS2P53152 137 aa10.31□□□□□ -0.76
TRN1tP(UGG)A RPL26AP05743 127 aaKnown RBP10.3□□□□□ -0.76
TRN1tP(UGG)A RPL26BP53221 127 aaKnown RBP10.3□□□□□ -0.76
TRN1tP(UGG)A ICY1Q04329 127 aa10.3□□□□□ -0.76
TRN1tP(UGG)A MET32Q12041 191 aa10.3□□□□□ -0.76
TRN1tP(UGG)A YOR034C-AQ3E735 80 aa10.3□□□□□ -0.76
TRN1tP(UGG)A YIL102C-AQ2V2P5 75 aa10.26□□□□□ -0.77
TRN1tP(UGG)A SAP30P38429 201 aa10.23□□□□□ -0.77
TRN1tP(UGG)A MHR1Q06630 226 aa10.22□□□□□ -0.77
TRN1tP(UGG)A MRPL24P36525 258 aaPredicted RBP10.21□□□□□ -0.77
TRN1tP(UGG)A HUR1P45820 110 aa10.21□□□□□ -0.77
TRN1tP(UGG)A YBR230W-AQ3E762 66 aa10.21□□□□□ -0.77
TRN1tP(UGG)A YNL042W-BQ3E7Z2 85 aa10.21□□□□□ -0.77
TRN1tP(UGG)A YPR170W-BP0C5R9 85 aa10.2□□□□□ -0.78
TRN1tP(UGG)A UIP3P39547 235 aa10.2□□□□□ -0.78
TRN1tP(UGG)A YNL198CP40166 100 aa10.2□□□□□ -0.78
TRN1tP(UGG)A YPL257WQ08974 193 aa10.19□□□□□ -0.78
TRN1tP(UGG)A YJL127C-BQ3E828 52 aa10.19□□□□□ -0.78
TRN1tP(UGG)A YER039C-AP0CD97 72 aa10.16□□□□□ -0.78
TRN1tP(UGG)A FYV5P25585 152 aa10.15□□□□□ -0.78
TRN1tP(UGG)A DDR2P89113 61 aa10.15□□□□□ -0.78
TRN1tP(UGG)A YLR236CA0A023PZG4 107 aa10.14□□□□□ -0.79
TRN1tP(UGG)A YBL112CQ3E7Y4 105 aa10.14□□□□□ -0.79
TRN1tP(UGG)A YLR156WP0CE96 114 aa10.13□□□□□ -0.79
TRN1tP(UGG)A YLR159WP0CE97 114 aa10.13□□□□□ -0.79
TRN1tP(UGG)A YLR161WP0CE98 114 aa10.13□□□□□ -0.79
TRN1tP(UGG)A DDR48P18899 430 aaKnown RBP10.12□□□□□ -0.79
TRN1tP(UGG)A SPT4P32914 102 aaPredicted RBP10.11□□□□□ -0.79
TRN1tP(UGG)A MPC3P53311 146 aa10.11□□□□□ -0.79
TRN1tP(UGG)A ISU2Q12056 156 aa10.11□□□□□ -0.79
TRN1tP(UGG)A YLR415CO13578 112 aa10.09□□□□□ -0.79
TRN1tP(UGG)A MSA2P36157 363 aa10.09□□□□□ -0.79
TRN1tP(UGG)A YFL067WP43537 175 aa10.08□□□□□ -0.8
TRN1tP(UGG)A HYP2P23301 157 aaKnown RBP10.07□□□□□ -0.8
TRN1tP(UGG)A TMA7Q3E764 64 aaKnown RBP10.06□□□□□ -0.8
TRN1tP(UGG)A EDC2P40023 145 aaPredicted RBP10.03□□□□□ -0.8
TRN1tP(UGG)A BSC4P53841 131 aa10.03□□□□□ -0.8
TRN1tP(UGG)A BET1P22804 142 aa9.99□□□□□ -0.81
TRN1tP(UGG)A YGL149WP53116 101 aa9.99□□□□□ -0.81
TRN1tP(UGG)A YHR007C-AQ07074 71 aa9.99□□□□□ -0.81
TRN1tP(UGG)A YGR121W-AQ3E816 71 aa9.98□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms