RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YIR021W-AQ3E739 70 aa1.42□□□□□ -2.18
RPC40YPR110C YOR304C-AO14468 76 aa1.41□□□□□ -2.18
RPC40YPR110C RPS22AP0C0W1 130 aaKnown RBP1.41□□□□□ -2.18
RPC40YPR110C SEC59P20048 519 aa1.41□□□□□ -2.18
RPC40YPR110C LSM2P38203 95 aaKnown RBP1.41□□□□□ -2.18
RPC40YPR110C POR2P40478 281 aa1.41□□□□□ -2.18
RPC40YPR110C IMP2P46972 177 aa1.41□□□□□ -2.18
RPC40YPR110C VPS55P47111 140 aa1.41□□□□□ -2.18
RPC40YPR110C YGR017WP53210 297 aa1.41□□□□□ -2.18
RPC40YPR110C ARL3Q02804 198 aa1.41□□□□□ -2.18
RPC40YPR110C ELC1Q03071 99 aa1.41□□□□□ -2.18
RPC40YPR110C SCS22Q6Q595 175 aa1.41□□□□□ -2.18
RPC40YPR110C YHR213WP0CI67 198 aa1.4□□□□□ -2.19
RPC40YPR110C YCR050CP25630 102 aa1.4□□□□□ -2.19
RPC40YPR110C ATG8P38182 117 aaRIP-Chip data1.4□□□□□ -2.19not detected
RPC40YPR110C CYB5P40312 120 aa1.4□□□□□ -2.19
RPC40YPR110C YIL163CP40448 117 aa1.4□□□□□ -2.19
RPC40YPR110C PHS1P40857 217 aa1.4□□□□□ -2.19
RPC40YPR110C VMA21P41806 77 aa1.4□□□□□ -2.19
RPC40YPR110C YPR145C-AQ2V2P0 78 aa1.4□□□□□ -2.19
RPC40YPR110C YBR090CP38253 122 aa1.39□□□□□ -2.19
RPC40YPR110C YHR173CP38864 112 aa1.39□□□□□ -2.19
RPC40YPR110C SNF11P38956 169 aa1.39□□□□□ -2.19
RPC40YPR110C YAL064WP39711 94 aa1.39□□□□□ -2.19
RPC40YPR110C HUA1P40325 198 aa1.39□□□□□ -2.19
RPC40YPR110C GAT4P40569 121 aa1.39□□□□□ -2.19
RPC40YPR110C PAU15P40585 124 aa1.39□□□□□ -2.19
RPC40YPR110C TOM7P53507 60 aa1.39□□□□□ -2.19
RPC40YPR110C ATP19P81451 68 aa1.39□□□□□ -2.19
RPC40YPR110C APS2Q00381 147 aa1.39□□□□□ -2.19
RPC40YPR110C ZEO1Q08245 113 aa1.39□□□□□ -2.19
RPC40YPR110C PRM3Q08931 133 aa1.39□□□□□ -2.19
RPC40YPR110C YDL157CQ12082 118 aa1.39□□□□□ -2.19
RPC40YPR110C YGR035W-AQ45U48 73 aa1.39□□□□□ -2.19
RPC40YPR110C TRA1P38811 3744 aa1.39□□□□□ -2.19
RPC40YPR110C NUM1Q00402 2748 aa1.38□□□□□ -2.19
RPC40YPR110C HSP10P38910 106 aa1.38□□□□□ -2.19
RPC40YPR110C YMR141CP40211 102 aa1.38□□□□□ -2.19
RPC40YPR110C GTT1P40582 234 aa1.38□□□□□ -2.19
RPC40YPR110C PAU5P43575 122 aa1.38□□□□□ -2.19
RPC40YPR110C YGL230CP53074 147 aa1.38□□□□□ -2.19
RPC40YPR110C YGR025WP53216 100 aa1.38□□□□□ -2.19
RPC40YPR110C AIM11P87275 137 aa1.38□□□□□ -2.19
RPC40YPR110C YOR105WQ08504 108 aa1.38□□□□□ -2.19
RPC40YPR110C YOR376W-AQ3E805 51 aa1.38□□□□□ -2.19
RPC40YPR110C YCL001W-BQ96VH2 84 aa1.38□□□□□ -2.19
RPC40YPR110C PAU19P0CE85 124 aa1.37□□□□□ -2.19
RPC40YPR110C PAU21P0CE86 164 aa1.37□□□□□ -2.19
RPC40YPR110C PAU22P0CE87 164 aa1.37□□□□□ -2.19
RPC40YPR110C HMRA1P0CY11 126 aa1.37□□□□□ -2.19
RPC40YPR110C PAU3P25610 124 aa1.37□□□□□ -2.19
RPC40YPR110C GSP1P32835 219 aaKnown RBP1.37□□□□□ -2.19
RPC40YPR110C YBR013CP38215 129 aa1.37□□□□□ -2.19
RPC40YPR110C MPC2P38857 129 aa1.37□□□□□ -2.19
RPC40YPR110C RPB11P38902 120 aa1.37□□□□□ -2.19
RPC40YPR110C SPG1P50088 95 aa1.37□□□□□ -2.19
RPC40YPR110C SAE3P89114 91 aa1.37□□□□□ -2.19
RPC40YPR110C SOM1Q05676 74 aa1.37□□□□□ -2.19
RPC40YPR110C DAD1Q12248 94 aa1.37□□□□□ -2.19
RPC40YPR110C YOR011W-AQ3E807 68 aa1.37□□□□□ -2.19
RPC40YPR110C YLR342W-AQ3E810 57 aa1.37□□□□□ -2.19
RPC40YPR110C YNR034W-AQ3E841 98 aa1.37□□□□□ -2.19
RPC40YPR110C YER039C-AP0CD97 72 aa1.36□□□□□ -2.19
RPC40YPR110C MRPL31P14063 131 aaPredicted RBP1.36□□□□□ -2.19
RPC40YPR110C FYV5P25585 152 aa1.36□□□□□ -2.19
RPC40YPR110C PAU7P39545 55 aa1.36□□□□□ -2.19
RPC40YPR110C SPI1P40092 148 aa1.36□□□□□ -2.19
RPC40YPR110C YLR042CQ07990 161 aa1.36□□□□□ -2.19
RPC40YPR110C CCW12Q12127 133 aa1.36□□□□□ -2.19
RPC40YPR110C CMC4Q3E7A9 73 aa1.36□□□□□ -2.19
RPC40YPR110C SSS1P35179 80 aa1.35□□□□□ -2.19
RPC40YPR110C QCR10P37299 77 aa1.35□□□□□ -2.19
RPC40YPR110C YAR029WP39549 74 aa1.35□□□□□ -2.19
RPC40YPR110C YFR035CP43608 114 aa1.35□□□□□ -2.19
RPC40YPR110C LSM8P47093 109 aaKnown RBP1.35□□□□□ -2.19
RPC40YPR110C GPI19Q04082 140 aa1.35□□□□□ -2.19
RPC40YPR110C RPS22BQ3E7Y3 130 aaKnown RBP1.35□□□□□ -2.19
RPC40YPR110C RPS11AP0CX47 156 aaKnown RBP1.34□□□□□ -2.19
RPC40YPR110C RPS11BP0CX48 156 aaKnown RBP1.34□□□□□ -2.19
RPC40YPR110C COX12Q01519 83 aa1.34□□□□□ -2.19
RPC40YPR110C SEN15Q04675 128 aa1.34□□□□□ -2.19
RPC40YPR110C LCL2Q08045 131 aa1.34□□□□□ -2.19
RPC40YPR110C YBR200W-AQ3E755 54 aa1.34□□□□□ -2.19
RPC40YPR110C PRE1P22141 198 aaKnown RBP1.33□□□□□ -2.2
RPC40YPR110C MRPL11P36521 249 aaPredicted RBP1.33□□□□□ -2.2
RPC40YPR110C DCV1P43595 202 aa1.33□□□□□ -2.2
RPC40YPR110C BRP1P53194 125 aa1.33□□□□□ -2.2
RPC40YPR110C YPR153WQ06537 140 aa1.33□□□□□ -2.2
RPC40YPR110C FYV7Q12247 151 aa1.33□□□□□ -2.2
RPC40YPR110C UTP20P35194 2493 aaKnown RBP1.32□□□□□ -2.2
RPC40YPR110C ANB1P19211 157 aa1.32□□□□□ -2.2
RPC40YPR110C YCR001WP25347 104 aa1.32□□□□□ -2.2
RPC40YPR110C YEL014CP39999 101 aa1.32□□□□□ -2.2
RPC40YPR110C YIL014C-AQ02598 104 aa1.32□□□□□ -2.2
RPC40YPR110C MGR2Q02889 113 aa1.32□□□□□ -2.2
RPC40YPR110C YCR075W-AQ3E830 75 aa1.32□□□□□ -2.2
RPC40YPR110C KTI11Q3E840 82 aa1.32□□□□□ -2.2
RPC40YPR110C COA6Q3E846 104 aa1.32□□□□□ -2.2
RPC40YPR110C YIL134C-AQ45U18 67 aa1.32□□□□□ -2.2
RPC40YPR110C PFY1P07274 126 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms