RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	CCW12	Q12127	133 aa		4.1	□□□□□ -1.75
NUD1	YOR373W	YHL042W	P38729	150 aa		4.09	□□□□□ -1.75
NUD1	YOR373W	ECM19	Q06011	112 aa		4.09	□□□□□ -1.75
NUD1	YOR373W	CWP2	P43497	92 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	SPG1	P50088	95 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	MRPS8	Q03799	155 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	NAT5	Q08689	176 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	YNR034W-A	Q3E841	98 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	SCS22	Q6Q595	175 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	RPS11A	P0CX47	156 aa	Known RBP	4.08	□□□□□ -1.76
NUD1	YOR373W	RPS11B	P0CX48	156 aa	Known RBP	4.08	□□□□□ -1.76
NUD1	YOR373W	THG1	P53215	237 aa	Known RBP	4.08	□□□□□ -1.76
NUD1	YOR373W	YMR007W	Q03675	126 aa		4.08	□□□□□ -1.76
NUD1	YOR373W	FIT2	Q08906	153 aa		4.07	□□□□□ -1.76
NUD1	YOR373W	DFM1	Q12743	341 aa	Known RBP	4.07	□□□□□ -1.76
NUD1	YOR373W	MIC10	Q96VH5	97 aa		4.07	□□□□□ -1.76
NUD1	YOR373W	YKL044W	P36092	106 aa		4.06	□□□□□ -1.76
NUD1	YOR373W	TDA2	P40045	126 aa		4.06	□□□□□ -1.76
NUD1	YOR373W	ARC15	P40518	154 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
NUD1	YOR373W	MSL1	P40567	111 aa	Predicted RBP	4.06	□□□□□ -1.76
NUD1	YOR373W	ECM12	O13529	151 aa		4.06	□□□□□ -1.76
NUD1	YOR373W	POR1	P04840	283 aa	Known RBP	4.05	□□□□□ -1.76
NUD1	YOR373W	UBC4	P15731	148 aa		4.05	□□□□□ -1.76
NUD1	YOR373W	YHR173C	P38864	112 aa		4.05	□□□□□ -1.76
NUD1	YOR373W	YGL118C	P53132	145 aa		4.05	□□□□□ -1.76
NUD1	YOR373W	HAL1	Q01766	294 aa		4.05	□□□□□ -1.76
NUD1	YOR373W	VAM10	Q08474	114 aa		4.05	□□□□□ -1.76
NUD1	YOR373W	YOR105W	Q08504	108 aa		4.05	□□□□□ -1.76
NUD1	YOR373W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.05	□□□□□ -1.76
NUD1	YOR373W	MDN1	Q12019	4910 aa	Known RBP	4.04	□□□□□ -1.76
NUD1	YOR373W	KNH1	P50112	268 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	LIP1	Q03579	150 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	YHR022C	P38763	256 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	DSK2	P48510	373 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	MPC3	P53311	146 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	ATP19	P81451	68 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	YDR115W	Q04598	105 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	YOR011W-A	Q3E807	68 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	YLR342W-A	Q3E810	57 aa		4.04	□□□□□ -1.76
NUD1	YOR373W	YFL067W	P43537	175 aa		4.03	□□□□□ -1.76
NUD1	YOR373W	CRC1	Q12289	327 aa		4.03	□□□□□ -1.76
NUD1	YOR373W	YOR381W-A	Q3E804	55 aa		4.03	□□□□□ -1.76
NUD1	YOR373W	YPR053C	Q6Q5F3	151 aa		4.03	□□□□□ -1.76
NUD1	YOR373W	MIG3	P39943	394 aa		4.02	□□□□□ -1.77
NUD1	YOR373W	SGF11	Q03067	99 aa		4.02	□□□□□ -1.77
NUD1	YOR373W	PRM7	Q12459	698 aa		4.02	□□□□□ -1.77
NUD1	YOR373W	YHR125W	P38831	101 aa		4.01	□□□□□ -1.77
NUD1	YOR373W	YNL217W	P40152	326 aa		4.01	□□□□□ -1.77
NUD1	YOR373W	GPI19	Q04082	140 aa		4.01	□□□□□ -1.77
NUD1	YOR373W	PAU16	P35994	123 aa		4.01	□□□□□ -1.77
NUD1	YOR373W	NRG2	P38082	220 aa		4	□□□□□ -1.77
NUD1	YOR373W	YIL163C	P40448	117 aa		4	□□□□□ -1.77
NUD1	YOR373W	RDS3	Q06835	107 aa	Predicted RBP	4	□□□□□ -1.77
NUD1	YOR373W	PAU23	Q07987	124 aa		4	□□□□□ -1.77
NUD1	YOR373W	PAU17	Q12370	124 aa		4	□□□□□ -1.77
NUD1	YOR373W	YGR240C-A	Q3E786	66 aa		3.99	□□□□□ -1.77
NUD1	YOR373W	YER078W-A	Q3E7A2	54 aa		3.99	□□□□□ -1.77
NUD1	YOR373W	RRT15	Q3E811	62 aa		3.99	□□□□□ -1.77
NUD1	YOR373W	YMR295C	Q03559	197 aa		3.99	□□□□□ -1.77
NUD1	YOR373W	YNL198C	P40166	100 aa		3.98	□□□□□ -1.77
NUD1	YOR373W	BRP1	P53194	125 aa		3.98	□□□□□ -1.77
NUD1	YOR373W	YCR085W	P25650	117 aa		3.97	□□□□□ -1.77
NUD1	YOR373W	QCR10	P37299	77 aa		3.97	□□□□□ -1.77
NUD1	YOR373W	YAL067W-A	Q8TGK6	75 aa		3.97	□□□□□ -1.77
NUD1	YOR373W	RSM19	P53733	91 aa	Predicted RBP	3.97	□□□□□ -1.77
NUD1	YOR373W	YLR296W	Q05898	108 aa		3.97	□□□□□ -1.77
NUD1	YOR373W	YCL021W-A	Q96VH3	125 aa		3.97	□□□□□ -1.77
NUD1	YOR373W	ATX1	P38636	73 aa		3.96	□□□□□ -1.78
NUD1	YOR373W	SOM1	Q05676	74 aa		3.96	□□□□□ -1.78
NUD1	YOR373W	YOL085C	Q99345	113 aa		3.96	□□□□□ -1.78
NUD1	YOR373W	YEL045C	P32616	141 aa		3.96	□□□□□ -1.78
NUD1	YOR373W	YGR025W	P53216	100 aa		3.96	□□□□□ -1.78
NUD1	YOR373W	MID2	P36027	376 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	YHL018W	P38744	120 aa	Predicted RBP	3.95	□□□□□ -1.78
NUD1	YOR373W	IGD1	P43598	195 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	YDL241W	Q07738	123 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	FYV5	P25585	152 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	PAU7	P39545	55 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	YDL157C	Q12082	118 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	DAD1	Q12248	94 aa		3.95	□□□□□ -1.78
NUD1	YOR373W	MRPL31	P14063	131 aa	Predicted RBP	3.94	□□□□□ -1.78
NUD1	YOR373W	FZF1	P32805	299 aa		3.94	□□□□□ -1.78
NUD1	YOR373W	RRT13	P40042	185 aa		3.94	□□□□□ -1.78
NUD1	YOR373W	SPC1	P46965	94 aa		3.94	□□□□□ -1.78
NUD1	YOR373W	TOM7	P53507	60 aa		3.94	□□□□□ -1.78
NUD1	YOR373W	ENV10	Q99382	181 aa		3.94	□□□□□ -1.78
NUD1	YOR373W	DAD4	P69851	72 aa		3.93	□□□□□ -1.78
NUD1	YOR373W	HUR1	P45820	110 aa		3.92	□□□□□ -1.78
NUD1	YOR373W	PBA1	Q05778	276 aa		3.92	□□□□□ -1.78
NUD1	YOR373W	SEC11	P15367	167 aa		3.92	□□□□□ -1.78
NUD1	YOR373W	YDR042C	Q03205	200 aa		3.92	□□□□□ -1.78
NUD1	YOR373W	YBR200W-A	Q3E755	54 aa		3.92	□□□□□ -1.78
NUD1	YOR373W	YHR032W-A	P0C5N6	59 aa		3.91	□□□□□ -1.78
NUD1	YOR373W	ERI1	P62651	68 aa	Known RBP	3.91	□□□□□ -1.78
NUD1	YOR373W	YDR119W-A	Q2V2P9	66 aa		3.91	□□□□□ -1.78
NUD1	YOR373W	YER187W	P40102	141 aa		3.9	□□□□□ -1.78
NUD1	YOR373W	EMC6	Q12431	108 aa		3.9	□□□□□ -1.78
NUD1	YOR373W	YPR010C-A	A5Z2X5	72 aa		3.9	□□□□□ -1.79
NUD1	YOR373W	YCR001W	P25347	104 aa		3.9	□□□□□ -1.79
NUD1	YOR373W	KRE1	P17260	313 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms